Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Gm6821-201ENSMUST00000107540 542 ntBASIC15.87■□□□□ 0.13
Trbv3A0A0A6YYE2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trbv3A0A0A6YYE2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC15.87■□□□□ 0.13
Trbv3A0A0A6YYE2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv3A0A0A6YYE2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv3A0A0A6YYE2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv3A0A0A6YYE2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trbv3A0A0A6YYE2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Trbv3A0A0A6YYE2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv3A0A0A6YYE2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv3A0A0A6YYE2 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.86■□□□□ 0.13
Trbv3A0A0A6YYE2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trbv3A0A0A6YYE2 AC116713.1-201ENSMUST00000215074 430 ntBASIC15.86■□□□□ 0.13
Trbv3A0A0A6YYE2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv3A0A0A6YYE2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv3A0A0A6YYE2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trbv3A0A0A6YYE2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv3A0A0A6YYE2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv3A0A0A6YYE2 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.85■□□□□ 0.13
Trbv3A0A0A6YYE2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv3A0A0A6YYE2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv3A0A0A6YYE2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.85■□□□□ 0.13
Trbv3A0A0A6YYE2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv3A0A0A6YYE2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv3A0A0A6YYE2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv3A0A0A6YYE2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv3A0A0A6YYE2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv3A0A0A6YYE2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv3A0A0A6YYE2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv3A0A0A6YYE2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv3A0A0A6YYE2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv3A0A0A6YYE2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv3A0A0A6YYE2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv3A0A0A6YYE2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.84■□□□□ 0.13
Trbv3A0A0A6YYE2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv3A0A0A6YYE2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv3A0A0A6YYE2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv3A0A0A6YYE2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv3A0A0A6YYE2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv3A0A0A6YYE2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.84■□□□□ 0.13
Trbv3A0A0A6YYE2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.84■□□□□ 0.13
Trbv3A0A0A6YYE2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv3A0A0A6YYE2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.84■□□□□ 0.13
Trbv3A0A0A6YYE2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv3A0A0A6YYE2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv3A0A0A6YYE2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv3A0A0A6YYE2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv3A0A0A6YYE2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Trbv3A0A0A6YYE2 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.83■□□□□ 0.12
Trbv3A0A0A6YYE2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trbv3A0A0A6YYE2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.83■□□□□ 0.12
Trbv3A0A0A6YYE2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv3A0A0A6YYE2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv3A0A0A6YYE2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv3A0A0A6YYE2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv3A0A0A6YYE2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv3A0A0A6YYE2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv3A0A0A6YYE2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv3A0A0A6YYE2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC15.82■□□□□ 0.12
Trbv3A0A0A6YYE2 Pkd1-207ENSMUST00000228550 1050 ntBASIC15.82■□□□□ 0.12
Trbv3A0A0A6YYE2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv3A0A0A6YYE2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv3A0A0A6YYE2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trbv3A0A0A6YYE2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv3A0A0A6YYE2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv3A0A0A6YYE2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC15.81■□□□□ 0.12
Trbv3A0A0A6YYE2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.81■□□□□ 0.12
Trbv3A0A0A6YYE2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv3A0A0A6YYE2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv3A0A0A6YYE2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC15.81■□□□□ 0.12
Trbv3A0A0A6YYE2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv3A0A0A6YYE2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv3A0A0A6YYE2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv3A0A0A6YYE2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv3A0A0A6YYE2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trbv3A0A0A6YYE2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Trbv3A0A0A6YYE2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv3A0A0A6YYE2 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.8■□□□□ 0.12
Trbv3A0A0A6YYE2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv3A0A0A6YYE2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv3A0A0A6YYE2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv3A0A0A6YYE2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv3A0A0A6YYE2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trbv3A0A0A6YYE2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv3A0A0A6YYE2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.8■□□□□ 0.12
Trbv3A0A0A6YYE2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv3A0A0A6YYE2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trbv3A0A0A6YYE2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.8■□□□□ 0.12
Trbv3A0A0A6YYE2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv3A0A0A6YYE2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv3A0A0A6YYE2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.8■□□□□ 0.12
Trbv3A0A0A6YYE2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv3A0A0A6YYE2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv3A0A0A6YYE2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trbv3A0A0A6YYE2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv3A0A0A6YYE2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv3A0A0A6YYE2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv3A0A0A6YYE2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC15.79■□□□□ 0.12
Trbv3A0A0A6YYE2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trbv3A0A0A6YYE2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms