Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 AC113347.2-201ENST00000512350 279 ntBASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 FAU-201ENST00000279259 461 ntTSL 2 BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 RNA5SP359-201ENST00000364838 113 ntBASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 RN7SL530P-201ENST00000485097 298 ntBASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 AC006122.1-201ENST00000493323 440 ntBASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 CISD2-202ENST00000503643 808 ntTSL 2 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 USB1-205ENST00000561743 1135 ntTSL 3 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 AC090510.3-201ENST00000615831 821 ntBASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 TNRC18P3-201ENST00000441896 2691 ntBASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms