Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOBEC1P41238 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOBEC1P41238 AC006001.1-201ENST00000325130 474 ntBASIC13.51□□□□□ -0.25
APOBEC1P41238 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOBEC1P41238 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.51□□□□□ -0.25
APOBEC1P41238 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.51□□□□□ -0.25
APOBEC1P41238 AC005034.1-201ENST00000426657 489 ntBASIC13.51□□□□□ -0.25
APOBEC1P41238 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOBEC1P41238 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.51□□□□□ -0.25
APOBEC1P41238 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOBEC1P41238 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.51□□□□□ -0.25
APOBEC1P41238 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOBEC1P41238 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.51□□□□□ -0.25
APOBEC1P41238 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.51□□□□□ -0.25
APOBEC1P41238 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOBEC1P41238 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.51□□□□□ -0.25
APOBEC1P41238 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.51□□□□□ -0.25
APOBEC1P41238 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.51□□□□□ -0.25
APOBEC1P41238 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.51□□□□□ -0.25
APOBEC1P41238 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.51□□□□□ -0.25
APOBEC1P41238 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.51□□□□□ -0.25
APOBEC1P41238 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
APOBEC1P41238 AC244669.2-201ENST00000612320 853 ntBASIC13.51□□□□□ -0.25
APOBEC1P41238 AC138951.2-201ENST00000623455 1161 ntBASIC13.51□□□□□ -0.25
APOBEC1P41238 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOBEC1P41238 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOBEC1P41238 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.51□□□□□ -0.25
APOBEC1P41238 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOBEC1P41238 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOBEC1P41238 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.5□□□□□ -0.25
APOBEC1P41238 AC011840.2-201ENST00000563063 1520 ntBASIC13.5□□□□□ -0.25
APOBEC1P41238 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOBEC1P41238 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
APOBEC1P41238 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOBEC1P41238 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOBEC1P41238 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOBEC1P41238 AL136172.1-201ENST00000598590 1394 ntBASIC13.5□□□□□ -0.25
APOBEC1P41238 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOBEC1P41238 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOBEC1P41238 MRPL37P1-201ENST00000592451 1337 ntBASIC13.5□□□□□ -0.25
APOBEC1P41238 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOBEC1P41238 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.5□□□□□ -0.25
APOBEC1P41238 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.5□□□□□ -0.25
APOBEC1P41238 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOBEC1P41238 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.5□□□□□ -0.25
APOBEC1P41238 AC234783.1-201ENST00000441761 496 ntBASIC13.5□□□□□ -0.25
APOBEC1P41238 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.5□□□□□ -0.25
APOBEC1P41238 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOBEC1P41238 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.5□□□□□ -0.25
APOBEC1P41238 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOBEC1P41238 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.5□□□□□ -0.25
APOBEC1P41238 ALG3P1-201ENST00000508806 1114 ntBASIC13.5□□□□□ -0.25
APOBEC1P41238 GCOM2-201ENST00000509133 1104 ntBASIC13.5□□□□□ -0.25
APOBEC1P41238 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.5□□□□□ -0.25
APOBEC1P41238 AP000812.2-201ENST00000538934 718 ntBASIC13.5□□□□□ -0.25
APOBEC1P41238 KRT17P8-201ENST00000540749 863 ntBASIC13.5□□□□□ -0.25
APOBEC1P41238 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.5□□□□□ -0.25
APOBEC1P41238 AC106820.3-201ENST00000561653 397 ntBASIC13.5□□□□□ -0.25
APOBEC1P41238 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.5□□□□□ -0.25
APOBEC1P41238 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.5□□□□□ -0.25
APOBEC1P41238 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.5□□□□□ -0.25
APOBEC1P41238 BX088702.1-201ENST00000610784 235 ntBASIC13.5□□□□□ -0.25
APOBEC1P41238 AL035252.4-201ENST00000624174 288 ntBASIC13.5□□□□□ -0.25
APOBEC1P41238 RHOXF1P1-202ENST00000635473 501 ntBASIC13.5□□□□□ -0.25
APOBEC1P41238 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOBEC1P41238 INTS4P1-203ENST00000641008 3683 ntBASIC13.5□□□□□ -0.25
APOBEC1P41238 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.5□□□□□ -0.25
APOBEC1P41238 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOBEC1P41238 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOBEC1P41238 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.5□□□□□ -0.25
APOBEC1P41238 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
APOBEC1P41238 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOBEC1P41238 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOBEC1P41238 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOBEC1P41238 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.5□□□□□ -0.25
APOBEC1P41238 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOBEC1P41238 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOBEC1P41238 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOBEC1P41238 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOBEC1P41238 AC140479.7-201ENST00000636301 2332 ntBASIC13.5□□□□□ -0.25
APOBEC1P41238 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
APOBEC1P41238 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.49□□□□□ -0.25
APOBEC1P41238 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.49□□□□□ -0.25
APOBEC1P41238 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 AL354989.2-201ENST00000435838 1540 ntBASIC13.49□□□□□ -0.25
APOBEC1P41238 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.49□□□□□ -0.25
APOBEC1P41238 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.49□□□□□ -0.25
APOBEC1P41238 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
APOBEC1P41238 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.49□□□□□ -0.25
APOBEC1P41238 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 AC007686.3-201ENST00000619017 3487 ntBASIC13.49□□□□□ -0.25
APOBEC1P41238 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms