Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 AC136759.1-202ENST00000530858 2194 ntBASIC14.94□□□□□ -0.02
HMGB4Q8WW32 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 AP002414.2-201ENST00000591780 3365 ntBASIC14.94□□□□□ -0.02
HMGB4Q8WW32 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 IGF1-203ENST00000392904 761 ntTSL 5 BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 CEP164P1-201ENST00000455142 418 ntBASIC14.94□□□□□ -0.02
HMGB4Q8WW32 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 MIR6720-201ENST00000611664 98 ntBASIC14.94□□□□□ -0.02
HMGB4Q8WW32 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 AC087481.3-201ENST00000602886 1894 ntBASIC14.93□□□□□ -0.02
HMGB4Q8WW32 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 FGFR3P1-201ENST00000449999 601 ntBASIC14.93□□□□□ -0.02
HMGB4Q8WW32 AC008267.1-201ENST00000474858 1069 ntBASIC14.93□□□□□ -0.02
HMGB4Q8WW32 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.93□□□□□ -0.02
HMGB4Q8WW32 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 AC003102.2-201ENST00000589195 1469 ntBASIC14.93□□□□□ -0.02
HMGB4Q8WW32 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 AC023824.1-201ENST00000562945 2975 ntBASIC14.93□□□□□ -0.02
HMGB4Q8WW32 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 SALL4P5-201ENST00000419001 1760 ntBASIC14.93□□□□□ -0.02
HMGB4Q8WW32 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
HMGB4Q8WW32 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms