Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC9.64□□□□□ -0.87
Sdc1P18828 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.64□□□□□ -0.87
Sdc1P18828 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Gm6124-201ENSMUST00000188240 2580 ntBASIC9.64□□□□□ -0.87
Sdc1P18828 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC9.63□□□□□ -0.87
Sdc1P18828 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC9.63□□□□□ -0.87
Sdc1P18828 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Sdc1P18828 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC9.63□□□□□ -0.87
Sdc1P18828 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC9.63□□□□□ -0.87
Sdc1P18828 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Sdc1P18828 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC9.63□□□□□ -0.87
Sdc1P18828 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Sdc1P18828 Gm13315-201ENSMUST00000120376 991 ntBASIC9.63□□□□□ -0.87
Sdc1P18828 Gm11637-201ENSMUST00000120601 592 ntBASIC9.63□□□□□ -0.87
Sdc1P18828 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC9.63□□□□□ -0.87
Sdc1P18828 Gm6439-201ENSMUST00000199849 862 ntBASIC9.63□□□□□ -0.87
Sdc1P18828 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC9.63□□□□□ -0.87
Sdc1P18828 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Sdc1P18828 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC9.63□□□□□ -0.87
Sdc1P18828 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Sdc1P18828 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC9.63□□□□□ -0.87
Sdc1P18828 Dhrs4-202ENSMUST00000226168 828 ntBASIC9.63□□□□□ -0.87
Sdc1P18828 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Sdc1P18828 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Sdc1P18828 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Sdc1P18828 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Sdc1P18828 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Sdc1P18828 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sdc1P18828 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Sdc1P18828 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Sdc1P18828 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Sdc1P18828 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC9.62□□□□□ -0.87
Sdc1P18828 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Sdc1P18828 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Gm2606-201ENSMUST00000100754 1002 ntBASIC9.62□□□□□ -0.87
Sdc1P18828 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Sdc1P18828 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC9.62□□□□□ -0.87
Sdc1P18828 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Gm12286-201ENSMUST00000119246 1002 ntBASIC9.62□□□□□ -0.87
Sdc1P18828 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC9.62□□□□□ -0.87
Sdc1P18828 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC9.62□□□□□ -0.87
Sdc1P18828 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC9.62□□□□□ -0.87
Sdc1P18828 AC151286.1-201ENSMUST00000198489 145 ntBASIC9.62□□□□□ -0.87
Sdc1P18828 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Sdc1P18828 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms