Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 C20orf85-201ENST00000371168 803 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 AC108073.2-201ENST00000464002 357 ntBASIC17.91■□□□□ 0.46
RTN4Q9NQC3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 AC106868.1-201ENST00000505272 992 ntBASIC17.91■□□□□ 0.46
RTN4Q9NQC3 AC073648.2-201ENST00000510116 352 ntBASIC17.91■□□□□ 0.46
RTN4Q9NQC3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 MIR3909-201ENST00000579518 119 ntBASIC17.91■□□□□ 0.46
RTN4Q9NQC3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 AC245297.3-201ENST00000611769 838 ntTSL 5 BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 AL109620.1-201ENST00000618738 1197 ntBASIC17.91■□□□□ 0.46
RTN4Q9NQC3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 AC138969.2-201ENST00000532739 9932 ntBASIC17.91■□□□□ 0.46
RTN4Q9NQC3 AL117378.2-201ENST00000622916 1337 ntBASIC17.91■□□□□ 0.46
RTN4Q9NQC3 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 PER1-202ENST00000354903 3115 ntTSL 2 BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 AC024568.1-201ENST00000517330 2260 ntBASIC17.91■□□□□ 0.46
RTN4Q9NQC3 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 AP002957.1-203ENST00000526091 1897 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 AC113367.3-201ENST00000508316 1912 ntBASIC17.9■□□□□ 0.46
RTN4Q9NQC3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 AL096817.1-201ENST00000623904 1775 ntBASIC17.9■□□□□ 0.46
RTN4Q9NQC3 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 AL390728.6-201ENST00000566446 1246 ntBASIC17.9■□□□□ 0.46
RTN4Q9NQC3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 SMIM8-207ENST00000608525 735 ntTSL 5 BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC17.9■□□□□ 0.46
RTN4Q9NQC3 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 ZBED1P1-201ENST00000502364 1930 ntBASIC17.9■□□□□ 0.46
RTN4Q9NQC3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4Q9NQC3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.89■□□□□ 0.46
RTN4Q9NQC3 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
RTN4Q9NQC3 TXNL4B-201ENST00000268483 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RTN4Q9NQC3 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
RTN4Q9NQC3 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
RTN4Q9NQC3 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTN4Q9NQC3 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
RTN4Q9NQC3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTN4Q9NQC3 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTN4Q9NQC3 PRDM2-204ENST00000376048 2688 ntTSL 2 BASIC17.89■□□□□ 0.45
RTN4Q9NQC3 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTN4Q9NQC3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC17.89■□□□□ 0.45
RTN4Q9NQC3 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC17.89■□□□□ 0.45
RTN4Q9NQC3 AC126365.1-201ENST00000578585 1514 ntBASIC17.89■□□□□ 0.45
RTN4Q9NQC3 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTN4Q9NQC3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.89■□□□□ 0.45
RTN4Q9NQC3 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms