Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Gm6263-201ENSMUST00000120029 1342 ntBASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Gm15321-201ENSMUST00000121290 288 ntBASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Gm29608-201ENSMUST00000190444 463 ntBASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Gm38297-201ENSMUST00000195122 1057 ntBASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 AC125117.1-201ENSMUST00000228121 468 ntBASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav3-3Q5R1C3 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Gm42571-201ENSMUST00000201197 2464 ntBASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Gm38194-201ENSMUST00000194529 2211 ntBASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Gm16202-201ENSMUST00000117532 544 ntBASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Gm5687-201ENSMUST00000118252 640 ntBASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC8.87□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms