Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.48■□□□□ 0.39
IRX3P78415 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.48■□□□□ 0.39
IRX3P78415 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.48■□□□□ 0.39
IRX3P78415 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IRX3P78415 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IRX3P78415 NORAD-201ENST00000565493 5339 ntBASIC17.48■□□□□ 0.39
IRX3P78415 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX3P78415 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.47■□□□□ 0.39
IRX3P78415 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX3P78415 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IRX3P78415 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IRX3P78415 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX3P78415 SLC9A3P3-201ENST00000457608 2229 ntBASIC17.47■□□□□ 0.39
IRX3P78415 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX3P78415 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX3P78415 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.47■□□□□ 0.39
IRX3P78415 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.47■□□□□ 0.39
IRX3P78415 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IRX3P78415 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX3P78415 AC104457.1-201ENST00000401024 814 ntBASIC17.47■□□□□ 0.39
IRX3P78415 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.47■□□□□ 0.39
IRX3P78415 MPRIPP1-201ENST00000452433 1089 ntBASIC17.47■□□□□ 0.39
IRX3P78415 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IRX3P78415 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.47■□□□□ 0.39
IRX3P78415 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.47■□□□□ 0.39
IRX3P78415 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.47■□□□□ 0.39
IRX3P78415 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.47■□□□□ 0.39
IRX3P78415 BNIP3P13-201ENST00000599968 566 ntBASIC17.47■□□□□ 0.39
IRX3P78415 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
IRX3P78415 AC004923.1-202ENST00000642106 209 ntBASIC17.47■□□□□ 0.39
IRX3P78415 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX3P78415 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.47■□□□□ 0.39
IRX3P78415 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.47■□□□□ 0.39
IRX3P78415 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.47■□□□□ 0.39
IRX3P78415 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
IRX3P78415 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX3P78415 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
IRX3P78415 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IRX3P78415 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX3P78415 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
IRX3P78415 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IRX3P78415 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
IRX3P78415 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IRX3P78415 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX3P78415 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX3P78415 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IRX3P78415 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
IRX3P78415 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
IRX3P78415 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.47■□□□□ 0.39
IRX3P78415 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
IRX3P78415 AP000593.2-201ENST00000542775 1433 ntBASIC17.47■□□□□ 0.39
IRX3P78415 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
IRX3P78415 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
IRX3P78415 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
IRX3P78415 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX3P78415 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX3P78415 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX3P78415 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.46■□□□□ 0.39
IRX3P78415 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX3P78415 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX3P78415 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX3P78415 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX3P78415 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX3P78415 AC008132.1-202ENST00000342005 1389 ntBASIC17.46■□□□□ 0.39
IRX3P78415 AC126177.1-201ENST00000547829 2218 ntBASIC17.46■□□□□ 0.39
IRX3P78415 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
IRX3P78415 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX3P78415 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX3P78415 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
IRX3P78415 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX3P78415 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX3P78415 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IRX3P78415 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IRX3P78415 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.46■□□□□ 0.39
IRX3P78415 MAGEA5-201ENST00000446757 942 ntBASIC17.46■□□□□ 0.39
IRX3P78415 TMEM198B-204ENST00000484016 896 ntBASIC17.46■□□□□ 0.39
IRX3P78415 AC024681.1-201ENST00000521917 487 ntBASIC17.46■□□□□ 0.39
IRX3P78415 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.46■□□□□ 0.39
IRX3P78415 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.46■□□□□ 0.39
IRX3P78415 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX3P78415 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.46■□□□□ 0.39
IRX3P78415 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX3P78415 AC010491.1-201ENST00000563101 2797 ntBASIC17.46■□□□□ 0.39
IRX3P78415 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
IRX3P78415 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX3P78415 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
IRX3P78415 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.46■□□□□ 0.39
IRX3P78415 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IRX3P78415 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IRX3P78415 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
IRX3P78415 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.46■□□□□ 0.38
IRX3P78415 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
IRX3P78415 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
IRX3P78415 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
IRX3P78415 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IRX3P78415 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IRX3P78415 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IRX3P78415 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.45■□□□□ 0.38
IRX3P78415 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC17.45■□□□□ 0.38
IRX3P78415 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms