Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH11P55287 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CDH11P55287 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH11P55287 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH11P55287 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH11P55287 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.8□□□□□ -0.2
CDH11P55287 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH11P55287 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CDH11P55287 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH11P55287 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH11P55287 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CDH11P55287 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH11P55287 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH11P55287 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH11P55287 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH11P55287 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH11P55287 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.8□□□□□ -0.2
CDH11P55287 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.8□□□□□ -0.2
CDH11P55287 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.8□□□□□ -0.2
CDH11P55287 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CDH11P55287 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.8□□□□□ -0.2
CDH11P55287 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.8□□□□□ -0.2
CDH11P55287 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CDH11P55287 API5-211ENST00000534695 560 ntTSL 5 BASIC13.8□□□□□ -0.2
CDH11P55287 TPRX2P-201ENST00000535362 881 ntBASIC13.8□□□□□ -0.2
CDH11P55287 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
CDH11P55287 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
CDH11P55287 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CDH11P55287 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH11P55287 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.8□□□□□ -0.2
CDH11P55287 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH11P55287 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.8□□□□□ -0.2
CDH11P55287 SRD5A3P1-201ENST00000603021 949 ntBASIC13.8□□□□□ -0.2
CDH11P55287 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.8□□□□□ -0.2
CDH11P55287 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.8□□□□□ -0.2
CDH11P55287 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CDH11P55287 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CDH11P55287 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.8□□□□□ -0.2
CDH11P55287 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH11P55287 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH11P55287 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.8□□□□□ -0.2
CDH11P55287 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH11P55287 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.8□□□□□ -0.2
CDH11P55287 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH11P55287 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.8□□□□□ -0.2
CDH11P55287 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH11P55287 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH11P55287 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH11P55287 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.8□□□□□ -0.2
CDH11P55287 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.8□□□□□ -0.2
CDH11P55287 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CDH11P55287 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH11P55287 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.8□□□□□ -0.2
CDH11P55287 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH11P55287 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH11P55287 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH11P55287 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CDH11P55287 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CDH11P55287 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.8□□□□□ -0.2
CDH11P55287 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH11P55287 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH11P55287 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDH11P55287 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDH11P55287 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CDH11P55287 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH11P55287 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.79□□□□□ -0.2
CDH11P55287 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH11P55287 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH11P55287 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH11P55287 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CDH11P55287 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
CDH11P55287 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH11P55287 AC010327.5-201ENST00000586923 3061 ntBASIC13.79□□□□□ -0.2
CDH11P55287 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH11P55287 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH11P55287 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDH11P55287 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH11P55287 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CDH11P55287 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH11P55287 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.79□□□□□ -0.2
CDH11P55287 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH11P55287 AC104457.1-201ENST00000401024 814 ntBASIC13.79□□□□□ -0.2
CDH11P55287 AC074338.1-201ENST00000416825 156 ntBASIC13.79□□□□□ -0.2
CDH11P55287 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH11P55287 NME2P1-201ENST00000426182 414 ntBASIC13.79□□□□□ -0.2
CDH11P55287 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.79□□□□□ -0.2
CDH11P55287 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH11P55287 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH11P55287 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.79□□□□□ -0.2
CDH11P55287 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.79□□□□□ -0.2
CDH11P55287 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH11P55287 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
CDH11P55287 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDH11P55287 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
CDH11P55287 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.79□□□□□ -0.2
CDH11P55287 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
CDH11P55287 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.79□□□□□ -0.2
CDH11P55287 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.79□□□□□ -0.2
CDH11P55287 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH11P55287 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms