Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 AC011742.3-201ENST00000439053 820 ntBASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 RN7SL769P-201ENST00000469386 295 ntBASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 AC022217.1-201ENST00000521069 738 ntBASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 MIR4683-201ENST00000579659 81 ntBASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 AC005324.6-201ENST00000587972 613 ntBASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 AC015967.2-201ENST00000624092 234 ntBASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 AL162426.1-201ENST00000624141 743 ntBASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 AC006435.4-201ENST00000625037 234 ntBASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 AL356737.1-201ENST00000634391 234 ntBASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 AC004923.1-202ENST00000642106 209 ntBASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 AL137783.1-201ENST00000623494 1896 ntBASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.65□□□□□ -0.07
CSNK1G3Q9Y6M4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 AC090616.6-203ENST00000579186 1945 ntBASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 AC010141.1-201ENST00000411585 623 ntBASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 AL133466.1-201ENST00000447582 150 ntBASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 AC013355.1-201ENST00000562625 723 ntBASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 AL645939.5-201ENST00000606834 243 ntBASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 AL136295.7-201ENST00000619226 1200 ntBASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 CU633904.3-201ENST00000624042 1029 ntBASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 CICP11-201ENST00000434745 2827 ntBASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 AC023157.3-201ENST00000619086 2088 ntBASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1G3Q9Y6M4 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSNK1G3Q9Y6M4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CSNK1G3Q9Y6M4 SHC1P1-201ENST00000425230 1745 ntBASIC14.63□□□□□ -0.07
CSNK1G3Q9Y6M4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CSNK1G3Q9Y6M4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms