Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 COX5BP1-201ENST00000507622 393 ntBASIC12.44□□□□□ -0.42
GAFA1Q96PS6 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 AC009093.2-202ENST00000620513 2079 ntBASIC12.44□□□□□ -0.42
GAFA1Q96PS6 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 AC007292.2-201ENST00000593524 1812 ntBASIC12.44□□□□□ -0.42
GAFA1Q96PS6 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 AL136172.1-201ENST00000598590 1394 ntBASIC12.43□□□□□ -0.42
GAFA1Q96PS6 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 AC004945.1-201ENST00000416738 983 ntBASIC12.43□□□□□ -0.42
GAFA1Q96PS6 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 AC022210.1-201ENST00000449856 793 ntBASIC12.43□□□□□ -0.42
GAFA1Q96PS6 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 GCOM2-201ENST00000509133 1104 ntBASIC12.43□□□□□ -0.42
GAFA1Q96PS6 IGHV3-71-201ENST00000523324 359 ntBASIC12.43□□□□□ -0.42
GAFA1Q96PS6 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 AC079316.1-201ENST00000548397 411 ntBASIC12.43□□□□□ -0.42
GAFA1Q96PS6 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 RN7SL713P-201ENST00000582127 302 ntBASIC12.43□□□□□ -0.42
GAFA1Q96PS6 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 AC073413.1-201ENST00000603927 732 ntBASIC12.43□□□□□ -0.42
GAFA1Q96PS6 AC017083.2-201ENST00000608069 979 ntBASIC12.43□□□□□ -0.42
GAFA1Q96PS6 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 AC007686.3-201ENST00000619017 3487 ntBASIC12.43□□□□□ -0.42
GAFA1Q96PS6 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
GAFA1Q96PS6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms