Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.55□□□□□ -0.24
Trim29Q8R2Q0 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim29Q8R2Q0 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim29Q8R2Q0 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.55□□□□□ -0.24
Trim29Q8R2Q0 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim29Q8R2Q0 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trim29Q8R2Q0 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim29Q8R2Q0 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trim29Q8R2Q0 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim29Q8R2Q0 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Gm22133-201ENSMUST00000102082 109 ntBASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Gm6082-201ENSMUST00000215204 454 ntBASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim29Q8R2Q0 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Gm11660-201ENSMUST00000120955 412 ntBASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Gm17376-201ENSMUST00000166016 84 ntBASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Gm27627-201ENSMUST00000183644 150 ntBASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim29Q8R2Q0 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trim29Q8R2Q0 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms