Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a2Q64739 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a2Q64739 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a2Q64739 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Col11a2Q64739 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.08□□□□□ -0.16
Col11a2Q64739 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a2Q64739 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a2Q64739 Gm9915-201ENSMUST00000066196 1383 ntBASIC14.08□□□□□ -0.16
Col11a2Q64739 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a2Q64739 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a2Q64739 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.08□□□□□ -0.16
Col11a2Q64739 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a2Q64739 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a2Q64739 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a2Q64739 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Col11a2Q64739 Gm28424-201ENSMUST00000187393 1319 ntBASIC14.08□□□□□ -0.16
Col11a2Q64739 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.08□□□□□ -0.16
Col11a2Q64739 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a2Q64739 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a2Q64739 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a2Q64739 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Col11a2Q64739 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a2Q64739 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a2Q64739 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a2Q64739 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Col11a2Q64739 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a2Q64739 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a2Q64739 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a2Q64739 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a2Q64739 Gm38314-201ENSMUST00000195709 625 ntBASIC14.07□□□□□ -0.16
Col11a2Q64739 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a2Q64739 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC14.07□□□□□ -0.16
Col11a2Q64739 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a2Q64739 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.07□□□□□ -0.16
Col11a2Q64739 AC154436.1-201ENSMUST00000227272 782 ntBASIC14.07□□□□□ -0.16
Col11a2Q64739 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Col11a2Q64739 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC14.07□□□□□ -0.16
Col11a2Q64739 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a2Q64739 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a2Q64739 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Col11a2Q64739 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a2Q64739 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a2Q64739 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a2Q64739 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Col11a2Q64739 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a2Q64739 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a2Q64739 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a2Q64739 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a2Q64739 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a2Q64739 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a2Q64739 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a2Q64739 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a2Q64739 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Col11a2Q64739 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC14.07□□□□□ -0.16
Col11a2Q64739 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Col11a2Q64739 Gm25872-201ENSMUST00000177784 100 ntBASIC14.07□□□□□ -0.16
Col11a2Q64739 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a2Q64739 Gm33707-201ENSMUST00000195135 569 ntBASIC14.07□□□□□ -0.16
Col11a2Q64739 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC14.07□□□□□ -0.16
Col11a2Q64739 AC164429.1-201ENSMUST00000224210 518 ntBASIC14.07□□□□□ -0.16
Col11a2Q64739 CT010486.3-201ENSMUST00000224555 811 ntBASIC14.07□□□□□ -0.16
Col11a2Q64739 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a2Q64739 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a2Q64739 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a2Q64739 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Col11a2Q64739 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a2Q64739 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a2Q64739 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a2Q64739 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a2Q64739 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a2Q64739 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a2Q64739 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a2Q64739 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a2Q64739 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a2Q64739 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC14.06□□□□□ -0.16
Col11a2Q64739 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC14.06□□□□□ -0.16
Col11a2Q64739 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a2Q64739 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a2Q64739 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Col11a2Q64739 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Col11a2Q64739 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a2Q64739 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.06□□□□□ -0.16
Col11a2Q64739 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Col11a2Q64739 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a2Q64739 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a2Q64739 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a2Q64739 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a2Q64739 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC14.06□□□□□ -0.16
Col11a2Q64739 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC14.06□□□□□ -0.16
Col11a2Q64739 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a2Q64739 Gm5342-201ENSMUST00000181982 1003 ntBASIC14.06□□□□□ -0.16
Col11a2Q64739 Gm29304-201ENSMUST00000186555 695 ntBASIC14.06□□□□□ -0.16
Col11a2Q64739 Gm29223-201ENSMUST00000188867 695 ntBASIC14.06□□□□□ -0.16
Col11a2Q64739 Gm37921-201ENSMUST00000194333 695 ntBASIC14.06□□□□□ -0.16
Col11a2Q64739 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Col11a2Q64739 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a2Q64739 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a2Q64739 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a2Q64739 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a2Q64739 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms