Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
VcanQ62059 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.82□□□□□ -0.68
VcanQ62059 Sav1-201ENSMUST00000021467 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.82□□□□□ -0.68
VcanQ62059 AC158636.1-201ENSMUST00000220118 1393 ntBASIC10.82□□□□□ -0.68
VcanQ62059 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 Gm8873-201ENSMUST00000217847 1439 ntBASIC10.82□□□□□ -0.68
VcanQ62059 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.82□□□□□ -0.68
VcanQ62059 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC10.82□□□□□ -0.68
VcanQ62059 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 Gm37365-201ENSMUST00000193109 409 ntBASIC10.82□□□□□ -0.68
VcanQ62059 Gm30946-201ENSMUST00000198288 724 ntBASIC10.82□□□□□ -0.68
VcanQ62059 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC10.82□□□□□ -0.68
VcanQ62059 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
VcanQ62059 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
VcanQ62059 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
VcanQ62059 1700092E19Rik-202ENSMUST00000154703 1650 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC10.82□□□□□ -0.68
VcanQ62059 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
VcanQ62059 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
VcanQ62059 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 Gm7765-201ENSMUST00000182585 974 ntBASIC10.82□□□□□ -0.68
VcanQ62059 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
VcanQ62059 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC10.82□□□□□ -0.68
VcanQ62059 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC10.82□□□□□ -0.68
VcanQ62059 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
VcanQ62059 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
VcanQ62059 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VcanQ62059 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VcanQ62059 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
VcanQ62059 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
VcanQ62059 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VcanQ62059 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.81□□□□□ -0.68
VcanQ62059 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
VcanQ62059 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VcanQ62059 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC10.81□□□□□ -0.68
VcanQ62059 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC10.81□□□□□ -0.68
VcanQ62059 Mir3100-201ENSMUST00000174918 65 ntBASIC10.81□□□□□ -0.68
VcanQ62059 Gm44917-201ENSMUST00000208798 520 ntBASIC10.81□□□□□ -0.68
VcanQ62059 Gm18001-201ENSMUST00000212023 688 ntBASIC10.81□□□□□ -0.68
VcanQ62059 Gm31763-201ENSMUST00000217788 673 ntTSL 3 BASIC10.81□□□□□ -0.68
VcanQ62059 Gm6859-201ENSMUST00000218614 989 ntBASIC10.81□□□□□ -0.68
VcanQ62059 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
VcanQ62059 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.81□□□□□ -0.68
VcanQ62059 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
VcanQ62059 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
VcanQ62059 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VcanQ62059 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC10.81□□□□□ -0.68
VcanQ62059 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VcanQ62059 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VcanQ62059 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VcanQ62059 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VcanQ62059 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC10.81□□□□□ -0.68
VcanQ62059 Gm20610-201ENSMUST00000176406 587 ntTSL 5 BASIC10.81□□□□□ -0.68
VcanQ62059 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VcanQ62059 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC10.81□□□□□ -0.68
VcanQ62059 AC107752.1-201ENSMUST00000219362 469 ntBASIC10.81□□□□□ -0.68
VcanQ62059 AC154305.2-201ENSMUST00000225813 901 ntBASIC10.81□□□□□ -0.68
VcanQ62059 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VcanQ62059 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VcanQ62059 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VcanQ62059 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.81□□□□□ -0.68
VcanQ62059 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
VcanQ62059 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VcanQ62059 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
VcanQ62059 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VcanQ62059 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
VcanQ62059 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VcanQ62059 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
VcanQ62059 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VcanQ62059 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Naa38-204ENSMUST00000144531 671 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC10.8□□□□□ -0.68
VcanQ62059 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Gm25591-201ENSMUST00000177317 94 ntBASIC10.8□□□□□ -0.68
VcanQ62059 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 AC134601.2-201ENSMUST00000221071 130 ntBASIC10.8□□□□□ -0.68
VcanQ62059 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
VcanQ62059 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms