Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Usp4P35123 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.47□□□□□ -0.41
Usp4P35123 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Usp4P35123 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.47□□□□□ -0.41
Usp4P35123 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.47□□□□□ -0.41
Usp4P35123 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Usp4P35123 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.47□□□□□ -0.41
Usp4P35123 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.47□□□□□ -0.41
Usp4P35123 Morn2-202ENSMUST00000227729 656 ntBASIC12.47□□□□□ -0.41
Usp4P35123 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp4P35123 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp4P35123 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Usp4P35123 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.47□□□□□ -0.41
Usp4P35123 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Usp4P35123 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Usp4P35123 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Usp4P35123 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Usp4P35123 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp4P35123 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp4P35123 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Usp4P35123 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Usp4P35123 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp4P35123 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Usp4P35123 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp4P35123 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp4P35123 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Usp4P35123 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp4P35123 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.46□□□□□ -0.41
Usp4P35123 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Usp4P35123 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Usp4P35123 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Usp4P35123 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp4P35123 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp4P35123 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Usp4P35123 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Usp4P35123 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Usp4P35123 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Usp4P35123 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp4P35123 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Usp4P35123 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp4P35123 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp4P35123 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Usp4P35123 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.46□□□□□ -0.41
Usp4P35123 Gm17376-201ENSMUST00000166016 84 ntBASIC12.46□□□□□ -0.41
Usp4P35123 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.46□□□□□ -0.41
Usp4P35123 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.46□□□□□ -0.41
Usp4P35123 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Usp4P35123 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.46□□□□□ -0.41
Usp4P35123 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Usp4P35123 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.46□□□□□ -0.41
Usp4P35123 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Usp4P35123 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.46□□□□□ -0.41
Usp4P35123 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp4P35123 Gm22058-201ENSMUST00000083393 310 ntBASIC12.46□□□□□ -0.41
Usp4P35123 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp4P35123 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
Usp4P35123 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Usp4P35123 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.46□□□□□ -0.42
Usp4P35123 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Usp4P35123 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.46□□□□□ -0.42
Usp4P35123 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Usp4P35123 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp4P35123 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp4P35123 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp4P35123 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp4P35123 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp4P35123 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp4P35123 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp4P35123 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.45□□□□□ -0.42
Usp4P35123 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp4P35123 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp4P35123 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.45□□□□□ -0.42
Usp4P35123 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp4P35123 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp4P35123 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Usp4P35123 Gm23912-201ENSMUST00000104687 87 ntBASIC12.45□□□□□ -0.42
Usp4P35123 Gm11439-201ENSMUST00000118598 409 ntBASIC12.45□□□□□ -0.42
Usp4P35123 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.45□□□□□ -0.42
Usp4P35123 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp4P35123 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp4P35123 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp4P35123 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.45□□□□□ -0.42
Usp4P35123 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp4P35123 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.45□□□□□ -0.42
Usp4P35123 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Usp4P35123 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.45□□□□□ -0.42
Usp4P35123 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp4P35123 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp4P35123 Gm39404-201ENSMUST00000216350 313 ntBASIC12.45□□□□□ -0.42
Usp4P35123 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp4P35123 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp4P35123 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp4P35123 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp4P35123 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp4P35123 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.45□□□□□ -0.42
Usp4P35123 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp4P35123 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp4P35123 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.45□□□□□ -0.42
Usp4P35123 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp4P35123 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms