Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 AC026434.2-201ENST00000506094 1078 ntBASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 AL359881.2-201ENST00000602973 570 ntBASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 MIR658-201ENST00000385210 100 ntBASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 MIR1909-201ENST00000411312 80 ntBASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 AC022210.1-201ENST00000449856 793 ntBASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 TPT1P11-201ENST00000458482 498 ntBASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 MIR6805-201ENST00000615055 62 ntBASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.57■□□□□ 0.4
SMARCC2Q8TAQ2 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 KRT8P35-201ENST00000483942 1338 ntBASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 AC092933.1-201ENST00000393644 945 ntBASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 FTH1P14-201ENST00000482930 551 ntBASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 AC022616.1-201ENST00000518688 554 ntBASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms