Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 AL136379.1-201ENST00000623471 2642 ntBASIC14.09□□□□□ -0.15
NUP43Q8NFH3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.09□□□□□ -0.15
NUP43Q8NFH3 DGCR5-201ENST00000399539 862 ntBASIC14.09□□□□□ -0.15
NUP43Q8NFH3 ACTBP8-201ENST00000403258 1108 ntBASIC14.09□□□□□ -0.15
NUP43Q8NFH3 EIF3FP3-201ENST00000434851 1086 ntBASIC14.09□□□□□ -0.15
NUP43Q8NFH3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 AC026434.2-201ENST00000506094 1078 ntBASIC14.09□□□□□ -0.15
NUP43Q8NFH3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 KRT8P35-201ENST00000483942 1338 ntBASIC14.09□□□□□ -0.15
NUP43Q8NFH3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.09□□□□□ -0.15
NUP43Q8NFH3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
NUP43Q8NFH3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.08□□□□□ -0.15
NUP43Q8NFH3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NUP43Q8NFH3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.08□□□□□ -0.15
NUP43Q8NFH3 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.08□□□□□ -0.15
NUP43Q8NFH3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.08□□□□□ -0.15
NUP43Q8NFH3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
NUP43Q8NFH3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NUP43Q8NFH3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
NUP43Q8NFH3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
NUP43Q8NFH3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
NUP43Q8NFH3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 AC139749.1-202ENST00000617529 3139 ntBASIC14.08□□□□□ -0.16
NUP43Q8NFH3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 AC093433.1-201ENST00000458048 571 ntBASIC14.08□□□□□ -0.16
NUP43Q8NFH3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 AC009486.1-201ENST00000569860 813 ntBASIC14.08□□□□□ -0.16
NUP43Q8NFH3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.08□□□□□ -0.16
NUP43Q8NFH3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 AC026748.1-201ENST00000624349 3251 ntBASIC14.08□□□□□ -0.16
NUP43Q8NFH3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NUP43Q8NFH3 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.07□□□□□ -0.16
NUP43Q8NFH3 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 AC005089.1-201ENST00000619486 2241 ntBASIC14.07□□□□□ -0.16
NUP43Q8NFH3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms