Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
CCDC7Q96M83 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC20.83■□□□□ 0.92
CCDC7Q96M83 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC7Q96M83 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC7Q96M83 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC7Q96M83 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CCDC7Q96M83 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC7Q96M83 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC7Q96M83 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC7Q96M83 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC7Q96M83 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC7Q96M83 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CCDC7Q96M83 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC7Q96M83 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CCDC7Q96M83 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC7Q96M83 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC7Q96M83 AC009093.2-202ENST00000620513 2079 ntBASIC20.82■□□□□ 0.92
CCDC7Q96M83 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC7Q96M83 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC7Q96M83 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC20.82■□□□□ 0.92
CCDC7Q96M83 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CCDC7Q96M83 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC7Q96M83 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC7Q96M83 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC7Q96M83 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC7Q96M83 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC7Q96M83 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC7Q96M83 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CCDC7Q96M83 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC20.82■□□□□ 0.92
CCDC7Q96M83 OARD1-212ENST00000482515 832 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC7Q96M83 GCOM2-201ENST00000509133 1104 ntBASIC20.82■□□□□ 0.92
CCDC7Q96M83 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC7Q96M83 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC7Q96M83 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC7Q96M83 KLK3-211ENST00000597483 810 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC7Q96M83 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC7Q96M83 AC106872.11-201ENST00000605838 421 ntBASIC20.82■□□□□ 0.92
CCDC7Q96M83 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC7Q96M83 AL008638.5-201ENST00000623814 1298 ntBASIC20.82■□□□□ 0.92
CCDC7Q96M83 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC7Q96M83 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CCDC7Q96M83 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC7Q96M83 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC7Q96M83 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CCDC7Q96M83 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC7Q96M83 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC7Q96M83 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CCDC7Q96M83 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC7Q96M83 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC7Q96M83 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC7Q96M83 TSPY26P-202ENST00000565928 3884 ntBASIC20.81■□□□□ 0.92
CCDC7Q96M83 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC7Q96M83 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC7Q96M83 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC7Q96M83 RPS3-201ENST00000278572 907 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC7Q96M83 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC7Q96M83 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC7Q96M83 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC7Q96M83 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC7Q96M83 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC7Q96M83 FAM197Y7-201ENST00000432892 766 ntBASIC20.81■□□□□ 0.92
CCDC7Q96M83 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC7Q96M83 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC7Q96M83 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC7Q96M83 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC7Q96M83 AC078819.1-201ENST00000547454 765 ntBASIC20.81■□□□□ 0.92
CCDC7Q96M83 AC012085.1-201ENST00000548270 765 ntBASIC20.81■□□□□ 0.92
CCDC7Q96M83 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC7Q96M83 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC7Q96M83 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CCDC7Q96M83 AC005695.3-201ENST00000614522 232 ntBASIC20.81■□□□□ 0.92
CCDC7Q96M83 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC7Q96M83 AC138951.2-201ENST00000623455 1161 ntBASIC20.81■□□□□ 0.92
CCDC7Q96M83 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CCDC7Q96M83 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC7Q96M83 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC7Q96M83 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC7Q96M83 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC7Q96M83 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC7Q96M83 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC7Q96M83 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CCDC7Q96M83 AC020910.5-201ENST00000623668 1865 ntBASIC20.8■□□□□ 0.92
CCDC7Q96M83 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC7Q96M83 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC7Q96M83 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC7Q96M83 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC7Q96M83 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC7Q96M83 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC7Q96M83 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC7Q96M83 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC7Q96M83 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC7Q96M83 ELK2AP-201ENST00000392510 1007 ntBASIC20.8■□□□□ 0.92
CCDC7Q96M83 RN7SKP175-201ENST00000408472 289 ntBASIC20.8■□□□□ 0.92
CCDC7Q96M83 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC7Q96M83 AC104306.2-201ENST00000451877 341 ntBASIC20.8■□□□□ 0.92
CCDC7Q96M83 IGHJ2P-201ENST00000454480 60 ntBASIC20.8■□□□□ 0.92
CCDC7Q96M83 TPT1P11-201ENST00000458482 498 ntBASIC20.8■□□□□ 0.92
CCDC7Q96M83 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC20.8■□□□□ 0.92
CCDC7Q96M83 ARTN-209ENST00000479128 471 ntTSL 3 BASIC20.8■□□□□ 0.92
CCDC7Q96M83 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms