Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.71■□□□□ 0.42
CCDC83Q8IWF9 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC83Q8IWF9 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
CCDC83Q8IWF9 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
CCDC83Q8IWF9 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
CCDC83Q8IWF9 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 AL139094.1-201ENST00000405549 1188 ntBASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 AC093004.1-201ENST00000508850 424 ntBASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 AL359711.2-201ENST00000563105 872 ntBASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 AC124283.3-201ENST00000570869 594 ntBASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 OS9-204ENST00000389146 2091 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC83Q8IWF9 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 AC041040.2-201ENST00000622926 2899 ntBASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 SPTLC1P1-201ENST00000447199 261 ntBASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 CYMP-203ENST00000474680 1263 ntBASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 AC022447.6-201ENST00000515522 438 ntBASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 DUX4L47-201ENST00000566374 394 ntBASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 KRT8P22-201ENST00000562317 1415 ntBASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 AC097376.2-205ENST00000610159 5334 ntBASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC83Q8IWF9 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 AL365209.1-201ENST00000624418 6473 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms