Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6aP27664 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pde6aP27664 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.81□□□□□ -0.2
Pde6aP27664 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.81□□□□□ -0.2
Pde6aP27664 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pde6aP27664 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.81□□□□□ -0.2
Pde6aP27664 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6aP27664 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.81□□□□□ -0.2
Pde6aP27664 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.81□□□□□ -0.2
Pde6aP27664 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6aP27664 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6aP27664 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6aP27664 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6aP27664 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6aP27664 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6aP27664 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6aP27664 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6aP27664 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6aP27664 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6aP27664 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6aP27664 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pde6aP27664 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6aP27664 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6aP27664 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6aP27664 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6aP27664 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6aP27664 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6aP27664 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pde6aP27664 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6aP27664 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6aP27664 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6aP27664 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.8□□□□□ -0.2
Pde6aP27664 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6aP27664 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.8□□□□□ -0.2
Pde6aP27664 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6aP27664 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6aP27664 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Pde6aP27664 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pde6aP27664 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.8□□□□□ -0.2
Pde6aP27664 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.8□□□□□ -0.2
Pde6aP27664 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Pde6aP27664 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.8□□□□□ -0.2
Pde6aP27664 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.8□□□□□ -0.2
Pde6aP27664 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6aP27664 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6aP27664 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6aP27664 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6aP27664 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Pde6aP27664 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.8□□□□□ -0.2
Pde6aP27664 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6aP27664 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6aP27664 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.8□□□□□ -0.2
Pde6aP27664 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6aP27664 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6aP27664 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6aP27664 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6aP27664 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6aP27664 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pde6aP27664 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pde6aP27664 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6aP27664 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pde6aP27664 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6aP27664 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6aP27664 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6aP27664 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6aP27664 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6aP27664 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6aP27664 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6aP27664 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6aP27664 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6aP27664 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pde6aP27664 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6aP27664 Gm11960-201ENSMUST00000122068 925 ntBASIC13.79□□□□□ -0.2
Pde6aP27664 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.79□□□□□ -0.2
Pde6aP27664 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
Pde6aP27664 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6aP27664 Gm2553-201ENSMUST00000215986 605 ntBASIC13.79□□□□□ -0.2
Pde6aP27664 Gm5369-201ENSMUST00000217499 588 ntBASIC13.79□□□□□ -0.2
Pde6aP27664 Gm21811-201ENSMUST00000096485 930 ntBASIC13.79□□□□□ -0.2
Pde6aP27664 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6aP27664 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.79□□□□□ -0.2
Pde6aP27664 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6aP27664 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6aP27664 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6aP27664 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6aP27664 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6aP27664 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6aP27664 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Pde6aP27664 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6aP27664 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pde6aP27664 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.79□□□□□ -0.2
Pde6aP27664 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.79□□□□□ -0.2
Pde6aP27664 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6aP27664 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6aP27664 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6aP27664 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pde6aP27664 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pde6aP27664 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pde6aP27664 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Pde6aP27664 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms