Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 DOC2GP-204ENST00000639052 2548 ntBASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 RPL5P21-201ENST00000404620 815 ntBASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 XBP1P1-201ENST00000436573 652 ntBASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 AC027139.1-201ENST00000565286 951 ntBASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 AC011471.3-201ENST00000623576 402 ntBASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 MME-218ENST00000625667 363 ntTSL 5 BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.73■□□□□ 0.27
PTCH2Q9Y6C5 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 LINC01815-202ENST00000641468 1409 ntBASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 DPY19L2P5-201ENST00000456300 331 ntBASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 AC055811.3-201ENST00000584952 686 ntBASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 FAM90A21P-201ENST00000510875 1396 ntBASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 FAM90A15P-201ENST00000514465 1395 ntBASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 FAM90A6P-201ENST00000515148 1394 ntBASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 FAM90A16P-201ENST00000526662 1395 ntBASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 FAM90A9P-201ENST00000527940 1395 ntBASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 FAM90A5P-201ENST00000528738 1395 ntBASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 FAM90A14P-201ENST00000530386 1395 ntBASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 FAM90A13P-201ENST00000534703 1395 ntBASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms