Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPRD1AQ96P16 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RPRD1AQ96P16 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.53■□□□□ 0.08
RPRD1AQ96P16 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPRD1AQ96P16 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RPRD1AQ96P16 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPRD1AQ96P16 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.53■□□□□ 0.08
RPRD1AQ96P16 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.53■□□□□ 0.08
RPRD1AQ96P16 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 YBX1P6-201ENST00000442962 1002 ntBASIC15.52■□□□□ 0.08
RPRD1AQ96P16 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.52■□□□□ 0.08
RPRD1AQ96P16 MIR6752-201ENST00000618442 71 ntBASIC15.52■□□□□ 0.08
RPRD1AQ96P16 AC138466.3-201ENST00000619983 221 ntBASIC15.52■□□□□ 0.08
RPRD1AQ96P16 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 AC008687.7-202ENST00000637404 953 ntBASIC15.52■□□□□ 0.08
RPRD1AQ96P16 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RPRD1AQ96P16 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.52■□□□□ 0.08
RPRD1AQ96P16 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RPRD1AQ96P16 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RPRD1AQ96P16 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.52■□□□□ 0.07
RPRD1AQ96P16 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RPRD1AQ96P16 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
RPRD1AQ96P16 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
RPRD1AQ96P16 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RPRD1AQ96P16 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RPRD1AQ96P16 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.52■□□□□ 0.07
RPRD1AQ96P16 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RPRD1AQ96P16 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RPRD1AQ96P16 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
RPRD1AQ96P16 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
RPRD1AQ96P16 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.52■□□□□ 0.07
RPRD1AQ96P16 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 OR2I1P-209ENST00000641730 5365 ntBASIC15.51■□□□□ 0.07
RPRD1AQ96P16 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 FAM21FP-201ENST00000426241 1131 ntBASIC15.51■□□□□ 0.07
RPRD1AQ96P16 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 FTLP10-202ENST00000505798 471 ntBASIC15.51■□□□□ 0.07
RPRD1AQ96P16 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 OR10B1P-201ENST00000601666 907 ntBASIC15.51■□□□□ 0.07
RPRD1AQ96P16 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RPRD1AQ96P16 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms