Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC010327.5-201ENST00000586923 3061 ntBASIC14.87□□□□□ -0.03
CDH3P22223 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
CDH3P22223 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.87□□□□□ -0.03
CDH3P22223 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH3P22223 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH3P22223 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH3P22223 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH3P22223 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CDH3P22223 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.87□□□□□ -0.03
CDH3P22223 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH3P22223 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CDH3P22223 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH3P22223 BAATP1-201ENST00000412284 1225 ntBASIC14.87□□□□□ -0.03
CDH3P22223 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.87□□□□□ -0.03
CDH3P22223 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH3P22223 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CDH3P22223 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH3P22223 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH3P22223 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH3P22223 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH3P22223 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH3P22223 AL359881.2-201ENST00000602973 570 ntBASIC14.87□□□□□ -0.03
CDH3P22223 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH3P22223 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH3P22223 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH3P22223 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH3P22223 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH3P22223 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH3P22223 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH3P22223 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH3P22223 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CDH3P22223 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH3P22223 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH3P22223 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH3P22223 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH3P22223 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CDH3P22223 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH3P22223 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH3P22223 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CDH3P22223 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
CDH3P22223 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CDH3P22223 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH3P22223 AC117489.1-201ENST00000625169 3217 ntBASIC14.87□□□□□ -0.03
CDH3P22223 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH3P22223 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH3P22223 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH3P22223 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH3P22223 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH3P22223 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDH3P22223 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH3P22223 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH3P22223 AC079776.1-201ENST00000401540 1152 ntBASIC14.86□□□□□ -0.03
CDH3P22223 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.86□□□□□ -0.03
CDH3P22223 BCRP2-202ENST00000447763 634 ntBASIC14.86□□□□□ -0.03
CDH3P22223 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.86□□□□□ -0.03
CDH3P22223 AC093433.1-201ENST00000458048 571 ntBASIC14.86□□□□□ -0.03
CDH3P22223 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH3P22223 GAPDHP40-201ENST00000505218 1006 ntBASIC14.86□□□□□ -0.03
CDH3P22223 BCRP6-201ENST00000510112 632 ntBASIC14.86□□□□□ -0.03
CDH3P22223 BCRP7-201ENST00000511549 544 ntBASIC14.86□□□□□ -0.03
CDH3P22223 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CDH3P22223 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.86□□□□□ -0.03
CDH3P22223 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH3P22223 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CDH3P22223 BX539320.1-201ENST00000623759 877 ntBASIC14.86□□□□□ -0.03
CDH3P22223 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH3P22223 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 AC005912.2-201ENST00000619492 2400 ntBASIC14.86□□□□□ -0.03
CDH3P22223 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH3P22223 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH3P22223 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 AC134312.5-201ENST00000568031 1313 ntBASIC14.86□□□□□ -0.03
CDH3P22223 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.86□□□□□ -0.03
CDH3P22223 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CDH3P22223 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH3P22223 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms