Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
COL11A1P12107 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL11A1P12107 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL11A1P12107 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL11A1P12107 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.71■□□□□ 0.27
COL11A1P12107 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL11A1P12107 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL11A1P12107 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL11A1P12107 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.71■□□□□ 0.27
COL11A1P12107 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.71■□□□□ 0.27
COL11A1P12107 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL11A1P12107 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.71■□□□□ 0.27
COL11A1P12107 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL11A1P12107 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL11A1P12107 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
COL11A1P12107 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL11A1P12107 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
COL11A1P12107 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL11A1P12107 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL11A1P12107 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
COL11A1P12107 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL11A1P12107 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.7■□□□□ 0.26
COL11A1P12107 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL11A1P12107 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.7■□□□□ 0.26
COL11A1P12107 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.7■□□□□ 0.26
COL11A1P12107 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.7■□□□□ 0.26
COL11A1P12107 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL11A1P12107 AC087045.2-201ENST00000606279 1003 ntBASIC16.7■□□□□ 0.26
COL11A1P12107 AC092171.5-201ENST00000608012 942 ntBASIC16.7■□□□□ 0.26
COL11A1P12107 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
COL11A1P12107 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.7■□□□□ 0.26
COL11A1P12107 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL11A1P12107 AC018442.1-201ENST00000421439 2061 ntBASIC16.7■□□□□ 0.26
COL11A1P12107 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.7■□□□□ 0.26
COL11A1P12107 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL11A1P12107 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL11A1P12107 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL11A1P12107 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL11A1P12107 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL11A1P12107 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL11A1P12107 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL11A1P12107 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL11A1P12107 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.7■□□□□ 0.26
COL11A1P12107 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL11A1P12107 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL11A1P12107 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.7■□□□□ 0.26
COL11A1P12107 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL11A1P12107 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.7■□□□□ 0.26
COL11A1P12107 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL11A1P12107 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
COL11A1P12107 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.7■□□□□ 0.26
COL11A1P12107 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL11A1P12107 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL11A1P12107 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL11A1P12107 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL11A1P12107 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.7■□□□□ 0.26
COL11A1P12107 AC073869.2-201ENST00000417338 1026 ntBASIC16.7■□□□□ 0.26
COL11A1P12107 RPL8P2-201ENST00000430538 502 ntBASIC16.7■□□□□ 0.26
COL11A1P12107 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.7■□□□□ 0.26
COL11A1P12107 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL11A1P12107 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.7■□□□□ 0.26
COL11A1P12107 AC103691.2-201ENST00000618824 433 ntBASIC16.7■□□□□ 0.26
COL11A1P12107 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC16.7■□□□□ 0.26
COL11A1P12107 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL11A1P12107 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.7■□□□□ 0.26
COL11A1P12107 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL11A1P12107 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL11A1P12107 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.69■□□□□ 0.26
COL11A1P12107 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
COL11A1P12107 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.69■□□□□ 0.26
COL11A1P12107 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
COL11A1P12107 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL11A1P12107 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL11A1P12107 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.69■□□□□ 0.26
COL11A1P12107 BANF1P3-201ENST00000412556 261 ntBASIC16.69■□□□□ 0.26
COL11A1P12107 AC026320.2-201ENST00000434379 478 ntBASIC16.69■□□□□ 0.26
COL11A1P12107 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.69■□□□□ 0.26
COL11A1P12107 RPL18AP3-201ENST00000462885 528 ntBASIC16.69■□□□□ 0.26
COL11A1P12107 RN7SL277P-201ENST00000481521 288 ntBASIC16.69■□□□□ 0.26
COL11A1P12107 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.69■□□□□ 0.26
COL11A1P12107 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.69■□□□□ 0.26
COL11A1P12107 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.69■□□□□ 0.26
COL11A1P12107 AC107464.3-201ENST00000609172 737 ntBASIC16.69■□□□□ 0.26
COL11A1P12107 AC073911.3-201ENST00000624401 631 ntBASIC16.69■□□□□ 0.26
COL11A1P12107 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.69■□□□□ 0.26
COL11A1P12107 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL11A1P12107 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL11A1P12107 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL11A1P12107 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
COL11A1P12107 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL11A1P12107 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.69■□□□□ 0.26
COL11A1P12107 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL11A1P12107 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL11A1P12107 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.69■□□□□ 0.26
COL11A1P12107 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL11A1P12107 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
COL11A1P12107 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.69■□□□□ 0.26
COL11A1P12107 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL11A1P12107 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
COL11A1P12107 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms