Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 KRT8P4-201ENST00000509735 1454 ntBASIC16.18■□□□□ 0.18
BEST2Q8NFU1 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 AC007969.1-201ENST00000433675 447 ntBASIC16.18■□□□□ 0.18
BEST2Q8NFU1 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 FAM86HP-204ENST00000513466 959 ntBASIC16.18■□□□□ 0.18
BEST2Q8NFU1 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 RN7SL219P-201ENST00000582872 296 ntBASIC16.18■□□□□ 0.18
BEST2Q8NFU1 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 AGAP7P-201ENST00000582299 2062 ntBASIC16.17■□□□□ 0.18
BEST2Q8NFU1 AGAP14-201ENST00000624701 2060 ntBASIC16.17■□□□□ 0.18
BEST2Q8NFU1 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 AL136309.1-201ENST00000403917 691 ntBASIC16.17■□□□□ 0.18
BEST2Q8NFU1 AC004945.1-201ENST00000416738 983 ntBASIC16.17■□□□□ 0.18
BEST2Q8NFU1 TLE1P1-201ENST00000422965 589 ntBASIC16.17■□□□□ 0.18
BEST2Q8NFU1 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 AL138725.1-201ENST00000407347 1314 ntBASIC16.17■□□□□ 0.18
BEST2Q8NFU1 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
BEST2Q8NFU1 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms