Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.62■□□□□ 0.09
CD48P09326 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.62■□□□□ 0.09
CD48P09326 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CD48P09326 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.62■□□□□ 0.09
CD48P09326 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD48P09326 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD48P09326 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
CD48P09326 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CD48P09326 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD48P09326 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD48P09326 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CD48P09326 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.62■□□□□ 0.09
CD48P09326 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CD48P09326 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CD48P09326 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD48P09326 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD48P09326 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CD48P09326 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.62■□□□□ 0.09
CD48P09326 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CD48P09326 ACTBP8-201ENST00000403258 1108 ntBASIC15.62■□□□□ 0.09
CD48P09326 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CD48P09326 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CD48P09326 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.62■□□□□ 0.09
CD48P09326 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.62■□□□□ 0.09
CD48P09326 AL162726.2-201ENST00000438986 1017 ntBASIC15.62■□□□□ 0.09
CD48P09326 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.62■□□□□ 0.09
CD48P09326 CRB3P1-201ENST00000449338 276 ntBASIC15.62■□□□□ 0.09
CD48P09326 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.62■□□□□ 0.09
CD48P09326 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CD48P09326 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CD48P09326 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CD48P09326 AP001063.1-201ENST00000568332 529 ntBASIC15.62■□□□□ 0.09
CD48P09326 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.62■□□□□ 0.09
CD48P09326 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
CD48P09326 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD48P09326 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
CD48P09326 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CD48P09326 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD48P09326 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
CD48P09326 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.62■□□□□ 0.09
CD48P09326 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CD48P09326 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
CD48P09326 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
CD48P09326 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CD48P09326 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CD48P09326 AL354702.1-201ENST00000442006 1960 ntBASIC15.62■□□□□ 0.09
CD48P09326 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD48P09326 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD48P09326 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD48P09326 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CD48P09326 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.61■□□□□ 0.09
CD48P09326 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.61■□□□□ 0.09
CD48P09326 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD48P09326 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD48P09326 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD48P09326 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD48P09326 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CD48P09326 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.61■□□□□ 0.09
CD48P09326 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CD48P09326 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CD48P09326 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD48P09326 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD48P09326 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD48P09326 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD48P09326 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD48P09326 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD48P09326 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.61■□□□□ 0.09
CD48P09326 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.61■□□□□ 0.09
CD48P09326 GIMAP3P-201ENST00000495150 836 ntBASIC15.61■□□□□ 0.09
CD48P09326 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.61■□□□□ 0.09
CD48P09326 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CD48P09326 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD48P09326 LRRC59-203ENST00000576448 1531 ntBASIC15.61■□□□□ 0.09
CD48P09326 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CD48P09326 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.61■□□□□ 0.09
CD48P09326 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD48P09326 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD48P09326 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD48P09326 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD48P09326 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.61■□□□□ 0.09
CD48P09326 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD48P09326 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.61■□□□□ 0.09
CD48P09326 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.61■□□□□ 0.09
CD48P09326 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.61■□□□□ 0.09
CD48P09326 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD48P09326 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD48P09326 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.6■□□□□ 0.09
CD48P09326 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.6■□□□□ 0.09
CD48P09326 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CD48P09326 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD48P09326 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.6■□□□□ 0.09
CD48P09326 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.6■□□□□ 0.09
CD48P09326 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CD48P09326 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CD48P09326 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD48P09326 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD48P09326 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.6■□□□□ 0.09
CD48P09326 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD48P09326 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD48P09326 ACKR1-201ENST00000368121 1240 ntBASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms