Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC099063.4-201ENST00000641099 1602 ntBASIC13.46□□□□□ -0.25
TRAF3IP2O43734 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 BAATP1-201ENST00000412284 1225 ntBASIC13.46□□□□□ -0.25
TRAF3IP2O43734 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 AC068587.3-201ENST00000526613 355 ntBASIC13.46□□□□□ -0.25
TRAF3IP2O43734 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 TDH-203ENST00000531764 1110 ntBASIC13.46□□□□□ -0.25
TRAF3IP2O43734 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 PTP4A1P2-201ENST00000546033 454 ntBASIC13.46□□□□□ -0.25
TRAF3IP2O43734 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 AL596325.1-201ENST00000563991 1082 ntBASIC13.46□□□□□ -0.25
TRAF3IP2O43734 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAF3IP2O43734 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAF3IP2O43734 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAF3IP2O43734 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
TRAF3IP2O43734 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAF3IP2O43734 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
TRAF3IP2O43734 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAF3IP2O43734 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.46□□□□□ -0.26
TRAF3IP2O43734 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 AC011495.1-201ENST00000498085 584 ntBASIC13.45□□□□□ -0.26
TRAF3IP2O43734 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms