Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 KCP-203ENST00000610776 5108 ntTSL 5 BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 AL136309.1-201ENST00000403917 691 ntBASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 AC021723.1-201ENST00000486306 515 ntBASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 MESTP3-201ENST00000503460 968 ntBASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 SCARNA20.5-201ENST00000516991 142 ntBASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 AC068587.10-201ENST00000641210 219 ntBASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 AL137783.1-201ENST00000623494 1896 ntBASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 HIST2H2BB-201ENST00000449108 381 ntBASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 AC091804.1-201ENST00000486888 567 ntBASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 AC126915.1-201ENST00000522847 1038 ntBASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 AC004466.1-201ENST00000599515 1080 ntBASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 AP001002.3-201ENST00000623482 206 ntBASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CTDP1Q9Y5B0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 REXO1L4P-201ENST00000605109 1937 ntBASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 FNTAP2-201ENST00000430308 634 ntBASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 CALR4P-201ENST00000431943 946 ntBASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 AKR7A2P1-201ENST00000460134 915 ntBASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms