Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 AP001267.2-201ENST00000532619 2086 ntBASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 SNX18-202ENST00000343017 3140 ntBASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
PCDH19Q8TAB3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.58■□□□□ 0.09
PCDH19Q8TAB3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PCDH19Q8TAB3 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDH19Q8TAB3 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDH19Q8TAB3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDH19Q8TAB3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PCDH19Q8TAB3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.58■□□□□ 0.09
PCDH19Q8TAB3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDH19Q8TAB3 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.58■□□□□ 0.09
PCDH19Q8TAB3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDH19Q8TAB3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.58■□□□□ 0.09
PCDH19Q8TAB3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.58■□□□□ 0.09
PCDH19Q8TAB3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDH19Q8TAB3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 GPR53P-205ENST00000457298 1084 ntBASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 AC022137.2-201ENST00000503482 481 ntBASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
PCDH19Q8TAB3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 ARSEP1-201ENST00000420443 635 ntBASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 ATP5G2P4-201ENST00000442175 420 ntBASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 HILS1-202ENST00000545329 423 ntBASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.57■□□□□ 0.08
PCDH19Q8TAB3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms