Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm9996-201ENSMUST00000070359 913 ntBASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Gm22323-201ENSMUST00000103832 109 ntBASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Gm15276-201ENSMUST00000145953 498 ntBASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.74□□□□□ -0.37
Syne3Q4FZC9 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Syne3Q4FZC9 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Gm24830-201ENSMUST00000102024 166 ntBASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Gm4034-201ENSMUST00000187674 480 ntBASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Gm37259-201ENSMUST00000193903 849 ntBASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Gm13097-201ENSMUST00000210722 397 ntBASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Gm6082-201ENSMUST00000215204 454 ntBASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Gm26232-201ENSMUST00000083360 166 ntBASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms