Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH12P55289 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH12P55289 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH12P55289 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.15□□□□□ -0.14
CDH12P55289 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH12P55289 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CDH12P55289 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH12P55289 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH12P55289 TOMM22P5-201ENST00000416399 439 ntBASIC14.15□□□□□ -0.14
CDH12P55289 AC107890.1-201ENST00000422478 521 ntBASIC14.15□□□□□ -0.14
CDH12P55289 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH12P55289 SDHAP3-202ENST00000515467 728 ntBASIC14.15□□□□□ -0.14
CDH12P55289 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.15□□□□□ -0.14
CDH12P55289 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.15□□□□□ -0.14
CDH12P55289 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CDH12P55289 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH12P55289 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH12P55289 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH12P55289 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
CDH12P55289 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
CDH12P55289 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CDH12P55289 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CDH12P55289 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH12P55289 AL645728.2-202ENST00000641679 227 ntBASIC14.15□□□□□ -0.14
CDH12P55289 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
CDH12P55289 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH12P55289 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH12P55289 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.15□□□□□ -0.14
CDH12P55289 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CDH12P55289 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.15□□□□□ -0.14
CDH12P55289 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CDH12P55289 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CDH12P55289 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH12P55289 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH12P55289 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
CDH12P55289 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CDH12P55289 AL121723.1-201ENST00000445194 1519 ntBASIC14.15□□□□□ -0.14
CDH12P55289 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH12P55289 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CDH12P55289 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
CDH12P55289 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.15□□□□□ -0.15
CDH12P55289 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH12P55289 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH12P55289 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH12P55289 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH12P55289 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH12P55289 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH12P55289 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH12P55289 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
CDH12P55289 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.14□□□□□ -0.15
CDH12P55289 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CDH12P55289 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CDH12P55289 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.14□□□□□ -0.15
CDH12P55289 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH12P55289 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
CDH12P55289 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH12P55289 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CDH12P55289 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH12P55289 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH12P55289 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
CDH12P55289 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.14□□□□□ -0.15
CDH12P55289 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CDH12P55289 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH12P55289 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH12P55289 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH12P55289 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.14□□□□□ -0.15
CDH12P55289 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH12P55289 AC104457.1-201ENST00000401024 814 ntBASIC14.14□□□□□ -0.15
CDH12P55289 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.14□□□□□ -0.15
CDH12P55289 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.14□□□□□ -0.15
CDH12P55289 KRT18P43-201ENST00000469825 1281 ntBASIC14.14□□□□□ -0.15
CDH12P55289 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.14□□□□□ -0.15
CDH12P55289 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH12P55289 AC140878.1-201ENST00000565277 250 ntBASIC14.14□□□□□ -0.15
CDH12P55289 AC015911.4-201ENST00000588022 1070 ntBASIC14.14□□□□□ -0.15
CDH12P55289 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
CDH12P55289 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH12P55289 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH12P55289 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH12P55289 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH12P55289 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH12P55289 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CDH12P55289 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH12P55289 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH12P55289 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
CDH12P55289 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH12P55289 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CDH12P55289 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.14□□□□□ -0.15
CDH12P55289 AC087499.5-201ENST00000452760 1342 ntBASIC14.14□□□□□ -0.15
CDH12P55289 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH12P55289 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH12P55289 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CDH12P55289 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.14□□□□□ -0.15
CDH12P55289 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.14□□□□□ -0.15
CDH12P55289 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.14□□□□□ -0.15
CDH12P55289 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH12P55289 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.13□□□□□ -0.15
CDH12P55289 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CDH12P55289 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.13□□□□□ -0.15
CDH12P55289 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms