Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC19.21■□□□□ 0.67
RXRBP28702 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RXRBP28702 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC19.21■□□□□ 0.67
RXRBP28702 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RXRBP28702 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RXRBP28702 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RXRBP28702 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC19.21■□□□□ 0.67
RXRBP28702 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
RXRBP28702 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.2■□□□□ 0.66
RXRBP28702 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RXRBP28702 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RXRBP28702 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RXRBP28702 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RXRBP28702 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RXRBP28702 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RXRBP28702 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.2■□□□□ 0.66
RXRBP28702 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.2■□□□□ 0.66
RXRBP28702 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC19.2■□□□□ 0.66
RXRBP28702 KRT18P44-201ENST00000416086 1285 ntBASIC19.2■□□□□ 0.66
RXRBP28702 SNRPCP15-201ENST00000424055 192 ntBASIC19.2■□□□□ 0.66
RXRBP28702 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC19.2■□□□□ 0.66
RXRBP28702 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC19.2■□□□□ 0.66
RXRBP28702 RN7SL128P-201ENST00000467883 305 ntBASIC19.2■□□□□ 0.66
RXRBP28702 RN7SL69P-201ENST00000468423 272 ntBASIC19.2■□□□□ 0.66
RXRBP28702 RN7SL363P-201ENST00000482412 273 ntBASIC19.2■□□□□ 0.66
RXRBP28702 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RXRBP28702 ACY3-202ENST00000529256 933 ntTSL 3 BASIC19.2■□□□□ 0.66
RXRBP28702 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC19.2■□□□□ 0.66
RXRBP28702 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC19.2■□□□□ 0.66
RXRBP28702 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC19.2■□□□□ 0.66
RXRBP28702 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RXRBP28702 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RXRBP28702 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RXRBP28702 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RXRBP28702 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.2■□□□□ 0.66
RXRBP28702 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RXRBP28702 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RXRBP28702 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RXRBP28702 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RXRBP28702 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC19.2■□□□□ 0.66
RXRBP28702 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RXRBP28702 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RXRBP28702 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RXRBP28702 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RXRBP28702 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RXRBP28702 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RXRBP28702 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.2■□□□□ 0.66
RXRBP28702 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RXRBP28702 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RXRBP28702 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RXRBP28702 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RXRBP28702 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.19■□□□□ 0.66
RXRBP28702 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RXRBP28702 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RXRBP28702 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RXRBP28702 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RXRBP28702 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RXRBP28702 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RXRBP28702 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RXRBP28702 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RXRBP28702 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RXRBP28702 PSAT1P2-201ENST00000426107 972 ntBASIC19.19■□□□□ 0.66
RXRBP28702 RN7SL375P-201ENST00000492442 298 ntBASIC19.19■□□□□ 0.66
RXRBP28702 TMA16-204ENST00000508268 608 ntTSL 2 BASIC19.19■□□□□ 0.66
RXRBP28702 MBP-230ENST00000528160 584 ntTSL 5 BASIC19.19■□□□□ 0.66
RXRBP28702 ANKRD26P1-203ENST00000569528 966 ntBASIC19.19■□□□□ 0.66
RXRBP28702 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC19.19■□□□□ 0.66
RXRBP28702 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC19.19■□□□□ 0.66
RXRBP28702 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RXRBP28702 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC19.19■□□□□ 0.66
RXRBP28702 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RXRBP28702 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RXRBP28702 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RXRBP28702 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RXRBP28702 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
RXRBP28702 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
RXRBP28702 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RXRBP28702 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RXRBP28702 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC19.19■□□□□ 0.66
RXRBP28702 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RXRBP28702 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
RXRBP28702 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC19.19■□□□□ 0.66
RXRBP28702 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
RXRBP28702 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC19.18■□□□□ 0.66
RXRBP28702 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.18■□□□□ 0.66
RXRBP28702 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RXRBP28702 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RXRBP28702 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RXRBP28702 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RXRBP28702 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RXRBP28702 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RXRBP28702 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RXRBP28702 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.18■□□□□ 0.66
RXRBP28702 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RXRBP28702 OR7E115P-201ENST00000382617 1024 ntBASIC19.18■□□□□ 0.66
RXRBP28702 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RXRBP28702 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC19.18■□□□□ 0.66
RXRBP28702 AP000244.1-201ENST00000424582 201 ntBASIC19.18■□□□□ 0.66
RXRBP28702 SAP18P2-201ENST00000434334 459 ntBASIC19.18■□□□□ 0.66
RXRBP28702 AC006328.1-201ENST00000437571 379 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms