Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm17825-201ENSMUST00000206836 794 ntBASIC13.9□□□□□ -0.18
Col1a1P11087 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC13.9□□□□□ -0.18
Col1a1P11087 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.9□□□□□ -0.18
Col1a1P11087 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col1a1P11087 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col1a1P11087 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Col1a1P11087 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col1a1P11087 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col1a1P11087 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col1a1P11087 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Col1a1P11087 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Col1a1P11087 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
Col1a1P11087 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Col1a1P11087 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col1a1P11087 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Col1a1P11087 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col1a1P11087 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col1a1P11087 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col1a1P11087 Gm22846-201ENSMUST00000157706 270 ntBASIC13.89□□□□□ -0.19
Col1a1P11087 Gm17070-201ENSMUST00000170463 784 ntBASIC13.89□□□□□ -0.19
Col1a1P11087 Gm43671-201ENSMUST00000200422 433 ntBASIC13.89□□□□□ -0.19
Col1a1P11087 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.89□□□□□ -0.19
Col1a1P11087 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC13.89□□□□□ -0.19
Col1a1P11087 Gm8899-201ENSMUST00000214635 1332 ntBASIC13.89□□□□□ -0.19
Col1a1P11087 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col1a1P11087 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Col1a1P11087 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col1a1P11087 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col1a1P11087 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Col1a1P11087 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col1a1P11087 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.89□□□□□ -0.19
Col1a1P11087 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.89□□□□□ -0.19
Col1a1P11087 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Col1a1P11087 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col1a1P11087 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col1a1P11087 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Col1a1P11087 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col1a1P11087 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col1a1P11087 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col1a1P11087 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col1a1P11087 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col1a1P11087 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col1a1P11087 Gm21759-201ENSMUST00000178345 1828 ntBASIC13.88□□□□□ -0.19
Col1a1P11087 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Col1a1P11087 Gm4294-201ENSMUST00000105169 614 ntBASIC13.88□□□□□ -0.19
Col1a1P11087 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Col1a1P11087 Gm12036-201ENSMUST00000120008 530 ntBASIC13.88□□□□□ -0.19
Col1a1P11087 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC13.88□□□□□ -0.19
Col1a1P11087 Gm25554-201ENSMUST00000158075 113 ntBASIC13.88□□□□□ -0.19
Col1a1P11087 Gm17214-201ENSMUST00000164501 541 ntBASIC13.88□□□□□ -0.19
Col1a1P11087 Gm43163-201ENSMUST00000196571 442 ntBASIC13.88□□□□□ -0.19
Col1a1P11087 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.88□□□□□ -0.19
Col1a1P11087 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC13.88□□□□□ -0.19
Col1a1P11087 AC153152.3-201ENSMUST00000222188 1135 ntBASIC13.88□□□□□ -0.19
Col1a1P11087 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.88□□□□□ -0.19
Col1a1P11087 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col1a1P11087 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Col1a1P11087 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col1a1P11087 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col1a1P11087 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col1a1P11087 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Col1a1P11087 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col1a1P11087 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.88□□□□□ -0.19
Col1a1P11087 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col1a1P11087 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col1a1P11087 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col1a1P11087 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.88□□□□□ -0.19
Col1a1P11087 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col1a1P11087 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col1a1P11087 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col1a1P11087 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col1a1P11087 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col1a1P11087 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC13.87□□□□□ -0.19
Col1a1P11087 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col1a1P11087 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col1a1P11087 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC13.87□□□□□ -0.19
Col1a1P11087 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col1a1P11087 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col1a1P11087 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.87□□□□□ -0.19
Col1a1P11087 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.87□□□□□ -0.19
Col1a1P11087 Gm45856-201ENSMUST00000212752 416 ntBASIC13.87□□□□□ -0.19
Col1a1P11087 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.87□□□□□ -0.19
Col1a1P11087 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC13.87□□□□□ -0.19
Col1a1P11087 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col1a1P11087 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.87□□□□□ -0.19
Col1a1P11087 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col1a1P11087 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col1a1P11087 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Col1a1P11087 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col1a1P11087 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Col1a1P11087 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col1a1P11087 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col1a1P11087 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col1a1P11087 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col1a1P11087 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col1a1P11087 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col1a1P11087 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col1a1P11087 Map1b-203ENSMUST00000223725 2669 ntBASIC13.87□□□□□ -0.19
Col1a1P11087 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Col1a1P11087 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms