Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Trim39Q9ESN2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim39Q9ESN2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim39Q9ESN2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.11■□□□□ 0.65
Trim39Q9ESN2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Trim39Q9ESN2 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.11■□□□□ 0.65
Trim39Q9ESN2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim39Q9ESN2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim39Q9ESN2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.1■□□□□ 0.65
Trim39Q9ESN2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim39Q9ESN2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim39Q9ESN2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim39Q9ESN2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim39Q9ESN2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.1■□□□□ 0.65
Trim39Q9ESN2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.1■□□□□ 0.65
Trim39Q9ESN2 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.1■□□□□ 0.65
Trim39Q9ESN2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Trim39Q9ESN2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim39Q9ESN2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim39Q9ESN2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim39Q9ESN2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim39Q9ESN2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Trim39Q9ESN2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim39Q9ESN2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim39Q9ESN2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim39Q9ESN2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim39Q9ESN2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim39Q9ESN2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.09■□□□□ 0.65
Trim39Q9ESN2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Trim39Q9ESN2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim39Q9ESN2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim39Q9ESN2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim39Q9ESN2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim39Q9ESN2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim39Q9ESN2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trim39Q9ESN2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim39Q9ESN2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trim39Q9ESN2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim39Q9ESN2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
Trim39Q9ESN2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim39Q9ESN2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.08■□□□□ 0.64
Trim39Q9ESN2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim39Q9ESN2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim39Q9ESN2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trim39Q9ESN2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim39Q9ESN2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim39Q9ESN2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim39Q9ESN2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim39Q9ESN2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Trim39Q9ESN2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trim39Q9ESN2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
Trim39Q9ESN2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Trim39Q9ESN2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim39Q9ESN2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim39Q9ESN2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.06■□□□□ 0.64
Trim39Q9ESN2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.06■□□□□ 0.64
Trim39Q9ESN2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Trim39Q9ESN2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim39Q9ESN2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Trim39Q9ESN2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim39Q9ESN2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim39Q9ESN2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim39Q9ESN2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim39Q9ESN2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim39Q9ESN2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trim39Q9ESN2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim39Q9ESN2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Trim39Q9ESN2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Trim39Q9ESN2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.05■□□□□ 0.64
Trim39Q9ESN2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim39Q9ESN2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Trim39Q9ESN2 Gm5921-201ENSMUST00000075898 882 ntBASIC19.05■□□□□ 0.64
Trim39Q9ESN2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim39Q9ESN2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trim39Q9ESN2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim39Q9ESN2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.05■□□□□ 0.64
Trim39Q9ESN2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim39Q9ESN2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim39Q9ESN2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim39Q9ESN2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim39Q9ESN2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim39Q9ESN2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Trim39Q9ESN2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim39Q9ESN2 Gm45444-201ENSMUST00000211394 898 ntBASIC19.04■□□□□ 0.64
Trim39Q9ESN2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim39Q9ESN2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim39Q9ESN2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim39Q9ESN2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim39Q9ESN2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim39Q9ESN2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim39Q9ESN2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim39Q9ESN2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim39Q9ESN2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim39Q9ESN2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim39Q9ESN2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim39Q9ESN2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim39Q9ESN2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim39Q9ESN2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.03■□□□□ 0.64
Trim39Q9ESN2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim39Q9ESN2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms