Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx6-1Q99MA9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx6-1Q99MA9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Nkx6-1Q99MA9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx6-1Q99MA9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx6-1Q99MA9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx6-1Q99MA9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Nkx6-1Q99MA9 Gm43060-201ENSMUST00000200621 289 ntBASIC19.49■□□□□ 0.71
Nkx6-1Q99MA9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx6-1Q99MA9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx6-1Q99MA9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.48■□□□□ 0.71
Nkx6-1Q99MA9 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.48■□□□□ 0.71
Nkx6-1Q99MA9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Nkx6-1Q99MA9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx6-1Q99MA9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx6-1Q99MA9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx6-1Q99MA9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx6-1Q99MA9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.48■□□□□ 0.71
Nkx6-1Q99MA9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx6-1Q99MA9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx6-1Q99MA9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.47■□□□□ 0.71
Nkx6-1Q99MA9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Nkx6-1Q99MA9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx6-1Q99MA9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx6-1Q99MA9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx6-1Q99MA9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.46■□□□□ 0.71
Nkx6-1Q99MA9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Nkx6-1Q99MA9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx6-1Q99MA9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx6-1Q99MA9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.46■□□□□ 0.71
Nkx6-1Q99MA9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.46■□□□□ 0.71
Nkx6-1Q99MA9 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.45■□□□□ 0.7
Nkx6-1Q99MA9 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.45■□□□□ 0.7
Nkx6-1Q99MA9 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.45■□□□□ 0.7
Nkx6-1Q99MA9 Gm7143-201ENSMUST00000222811 859 ntBASIC19.45■□□□□ 0.7
Nkx6-1Q99MA9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx6-1Q99MA9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx6-1Q99MA9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx6-1Q99MA9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Nkx6-1Q99MA9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx6-1Q99MA9 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.44■□□□□ 0.7
Nkx6-1Q99MA9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx6-1Q99MA9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Nkx6-1Q99MA9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx6-1Q99MA9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx6-1Q99MA9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx6-1Q99MA9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Nkx6-1Q99MA9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx6-1Q99MA9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx6-1Q99MA9 Gm37179-201ENSMUST00000194862 823 ntBASIC19.43■□□□□ 0.7
Nkx6-1Q99MA9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx6-1Q99MA9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Nkx6-1Q99MA9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx6-1Q99MA9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx6-1Q99MA9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx6-1Q99MA9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx6-1Q99MA9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx6-1Q99MA9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx6-1Q99MA9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx6-1Q99MA9 Gm27011-201ENSMUST00000182352 972 ntBASIC19.42■□□□□ 0.7
Nkx6-1Q99MA9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Nkx6-1Q99MA9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx6-1Q99MA9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx6-1Q99MA9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx6-1Q99MA9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx6-1Q99MA9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx6-1Q99MA9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx6-1Q99MA9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx6-1Q99MA9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx6-1Q99MA9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx6-1Q99MA9 Gm40848-201ENSMUST00000221998 324 ntBASIC19.4■□□□□ 0.7
Nkx6-1Q99MA9 Spcs1-204ENSMUST00000226782 949 ntBASIC19.4■□□□□ 0.7
Nkx6-1Q99MA9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx6-1Q99MA9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx6-1Q99MA9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx6-1Q99MA9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx6-1Q99MA9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx6-1Q99MA9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx6-1Q99MA9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx6-1Q99MA9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.39■□□□□ 0.69
Nkx6-1Q99MA9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.39■□□□□ 0.69
Nkx6-1Q99MA9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx6-1Q99MA9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx6-1Q99MA9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx6-1Q99MA9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx6-1Q99MA9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx6-1Q99MA9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx6-1Q99MA9 Gm10849-201ENSMUST00000100397 618 ntBASIC19.38■□□□□ 0.69
Nkx6-1Q99MA9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx6-1Q99MA9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.38■□□□□ 0.69
Nkx6-1Q99MA9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx6-1Q99MA9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.38■□□□□ 0.69
Nkx6-1Q99MA9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx6-1Q99MA9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx6-1Q99MA9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx6-1Q99MA9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx6-1Q99MA9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Nkx6-1Q99MA9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx6-1Q99MA9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx6-1Q99MA9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms