Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Rnf8Q8VC56 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Rnf8Q8VC56 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf8Q8VC56 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf8Q8VC56 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf8Q8VC56 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf8Q8VC56 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rnf8Q8VC56 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.78■□□□□ 0.76
Rnf8Q8VC56 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf8Q8VC56 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf8Q8VC56 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf8Q8VC56 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf8Q8VC56 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.78■□□□□ 0.76
Rnf8Q8VC56 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf8Q8VC56 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf8Q8VC56 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf8Q8VC56 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf8Q8VC56 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
Rnf8Q8VC56 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf8Q8VC56 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf8Q8VC56 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf8Q8VC56 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Rnf8Q8VC56 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf8Q8VC56 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Rnf8Q8VC56 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf8Q8VC56 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf8Q8VC56 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf8Q8VC56 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rnf8Q8VC56 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf8Q8VC56 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Rnf8Q8VC56 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf8Q8VC56 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf8Q8VC56 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf8Q8VC56 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf8Q8VC56 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.75■□□□□ 0.75
Rnf8Q8VC56 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.75■□□□□ 0.75
Rnf8Q8VC56 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
Rnf8Q8VC56 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Rnf8Q8VC56 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf8Q8VC56 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.75■□□□□ 0.75
Rnf8Q8VC56 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf8Q8VC56 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf8Q8VC56 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf8Q8VC56 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf8Q8VC56 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.74■□□□□ 0.75
Rnf8Q8VC56 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.74■□□□□ 0.75
Rnf8Q8VC56 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.74■□□□□ 0.75
Rnf8Q8VC56 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf8Q8VC56 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.74■□□□□ 0.75
Rnf8Q8VC56 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Rnf8Q8VC56 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf8Q8VC56 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf8Q8VC56 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf8Q8VC56 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf8Q8VC56 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf8Q8VC56 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rnf8Q8VC56 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf8Q8VC56 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf8Q8VC56 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf8Q8VC56 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf8Q8VC56 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf8Q8VC56 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf8Q8VC56 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rnf8Q8VC56 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf8Q8VC56 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf8Q8VC56 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.72■□□□□ 0.75
Rnf8Q8VC56 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf8Q8VC56 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf8Q8VC56 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Rnf8Q8VC56 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf8Q8VC56 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf8Q8VC56 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Rnf8Q8VC56 Gm13238-201ENSMUST00000117655 780 ntBASIC19.71■□□□□ 0.75
Rnf8Q8VC56 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf8Q8VC56 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf8Q8VC56 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf8Q8VC56 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf8Q8VC56 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf8Q8VC56 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf8Q8VC56 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.7■□□□□ 0.74
Rnf8Q8VC56 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf8Q8VC56 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.7■□□□□ 0.74
Rnf8Q8VC56 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf8Q8VC56 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf8Q8VC56 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf8Q8VC56 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Rnf8Q8VC56 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf8Q8VC56 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.68■□□□□ 0.74
Rnf8Q8VC56 Gm15546-201ENSMUST00000122095 826 ntBASIC19.68■□□□□ 0.74
Rnf8Q8VC56 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.68■□□□□ 0.74
Rnf8Q8VC56 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rnf8Q8VC56 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf8Q8VC56 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rnf8Q8VC56 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf8Q8VC56 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf8Q8VC56 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf8Q8VC56 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf8Q8VC56 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf8Q8VC56 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf8Q8VC56 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms