Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trim9Q8C7M3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.91■■□□□ 1.26
Trim9Q8C7M3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Trim9Q8C7M3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Trim9Q8C7M3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Trim9Q8C7M3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Trim9Q8C7M3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Trim9Q8C7M3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Trim9Q8C7M3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Trim9Q8C7M3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Trim9Q8C7M3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Trim9Q8C7M3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Trim9Q8C7M3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Trim9Q8C7M3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Trim9Q8C7M3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Trim9Q8C7M3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Trim9Q8C7M3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Trim9Q8C7M3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.89■■□□□ 1.25
Trim9Q8C7M3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Trim9Q8C7M3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Trim9Q8C7M3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Trim9Q8C7M3 Gm4430-201ENSMUST00000192413 1943 ntBASIC22.88■■□□□ 1.25
Trim9Q8C7M3 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.88■■□□□ 1.25
Trim9Q8C7M3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Trim9Q8C7M3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
Trim9Q8C7M3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC22.88■■□□□ 1.25
Trim9Q8C7M3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Trim9Q8C7M3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Trim9Q8C7M3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Trim9Q8C7M3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Trim9Q8C7M3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Trim9Q8C7M3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC22.87■■□□□ 1.25
Trim9Q8C7M3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Trim9Q8C7M3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Trim9Q8C7M3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Trim9Q8C7M3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Trim9Q8C7M3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.86■■□□□ 1.25
Trim9Q8C7M3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.86■■□□□ 1.25
Trim9Q8C7M3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.85■■□□□ 1.25
Trim9Q8C7M3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Trim9Q8C7M3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Trim9Q8C7M3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Trim9Q8C7M3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Trim9Q8C7M3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Trim9Q8C7M3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Trim9Q8C7M3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Trim9Q8C7M3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Trim9Q8C7M3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Trim9Q8C7M3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Trim9Q8C7M3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Trim9Q8C7M3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Trim9Q8C7M3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.84■■□□□ 1.25
Trim9Q8C7M3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.84■■□□□ 1.25
Trim9Q8C7M3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Trim9Q8C7M3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Trim9Q8C7M3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Trim9Q8C7M3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.83■■□□□ 1.25
Trim9Q8C7M3 Gm15820-201ENSMUST00000201566 728 ntBASIC22.83■■□□□ 1.25
Trim9Q8C7M3 Gm40881-201ENSMUST00000223397 166 ntBASIC22.83■■□□□ 1.25
Trim9Q8C7M3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Trim9Q8C7M3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.83■■□□□ 1.25
Trim9Q8C7M3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Trim9Q8C7M3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Trim9Q8C7M3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.24
Trim9Q8C7M3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trim9Q8C7M3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
Trim9Q8C7M3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trim9Q8C7M3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trim9Q8C7M3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trim9Q8C7M3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Trim9Q8C7M3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trim9Q8C7M3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.81■■□□□ 1.24
Trim9Q8C7M3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trim9Q8C7M3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trim9Q8C7M3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Trim9Q8C7M3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC22.8■■□□□ 1.24
Trim9Q8C7M3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Trim9Q8C7M3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC22.8■■□□□ 1.24
Trim9Q8C7M3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Trim9Q8C7M3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Trim9Q8C7M3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Trim9Q8C7M3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC22.8■■□□□ 1.24
Trim9Q8C7M3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Trim9Q8C7M3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Trim9Q8C7M3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Trim9Q8C7M3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Trim9Q8C7M3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Trim9Q8C7M3 Gm15546-201ENSMUST00000122095 826 ntBASIC22.79■■□□□ 1.24
Trim9Q8C7M3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.79■■□□□ 1.24
Trim9Q8C7M3 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.79■■□□□ 1.24
Trim9Q8C7M3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Trim9Q8C7M3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Trim9Q8C7M3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Trim9Q8C7M3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Trim9Q8C7M3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Trim9Q8C7M3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.78■■□□□ 1.24
Trim9Q8C7M3 Snhg20-203ENSMUST00000182811 2153 ntBASIC22.78■■□□□ 1.24
Trim9Q8C7M3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.78■■□□□ 1.24
Trim9Q8C7M3 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.78■■□□□ 1.24
Trim9Q8C7M3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms