Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cfap54Q8C6S9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cfap54Q8C6S9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cfap54Q8C6S9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.2■□□□□ 0.83
Cfap54Q8C6S9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.83
Cfap54Q8C6S9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cfap54Q8C6S9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cfap54Q8C6S9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cfap54Q8C6S9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.2■□□□□ 0.82
Cfap54Q8C6S9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.19■□□□□ 0.82
Cfap54Q8C6S9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cfap54Q8C6S9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cfap54Q8C6S9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cfap54Q8C6S9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap54Q8C6S9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap54Q8C6S9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap54Q8C6S9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap54Q8C6S9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.18■□□□□ 0.82
Cfap54Q8C6S9 Gm42642-201ENSMUST00000200683 355 ntBASIC20.18■□□□□ 0.82
Cfap54Q8C6S9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap54Q8C6S9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap54Q8C6S9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cfap54Q8C6S9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.18■□□□□ 0.82
Cfap54Q8C6S9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.18■□□□□ 0.82
Cfap54Q8C6S9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.18■□□□□ 0.82
Cfap54Q8C6S9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap54Q8C6S9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap54Q8C6S9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
Cfap54Q8C6S9 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.17■□□□□ 0.82
Cfap54Q8C6S9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap54Q8C6S9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
Cfap54Q8C6S9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap54Q8C6S9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap54Q8C6S9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap54Q8C6S9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap54Q8C6S9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap54Q8C6S9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Cfap54Q8C6S9 Spcs1-204ENSMUST00000226782 949 ntBASIC20.16■□□□□ 0.82
Cfap54Q8C6S9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Cfap54Q8C6S9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap54Q8C6S9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap54Q8C6S9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Cfap54Q8C6S9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap54Q8C6S9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap54Q8C6S9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap54Q8C6S9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cfap54Q8C6S9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cfap54Q8C6S9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cfap54Q8C6S9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.15■□□□□ 0.82
Cfap54Q8C6S9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cfap54Q8C6S9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.15■□□□□ 0.82
Cfap54Q8C6S9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cfap54Q8C6S9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cfap54Q8C6S9 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.15■□□□□ 0.82
Cfap54Q8C6S9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cfap54Q8C6S9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cfap54Q8C6S9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Cfap54Q8C6S9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cfap54Q8C6S9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cfap54Q8C6S9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.14■□□□□ 0.81
Cfap54Q8C6S9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cfap54Q8C6S9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.13■□□□□ 0.81
Cfap54Q8C6S9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.13■□□□□ 0.81
Cfap54Q8C6S9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Cfap54Q8C6S9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.13■□□□□ 0.81
Cfap54Q8C6S9 Gm43060-201ENSMUST00000200621 289 ntBASIC20.13■□□□□ 0.81
Cfap54Q8C6S9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cfap54Q8C6S9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cfap54Q8C6S9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cfap54Q8C6S9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cfap54Q8C6S9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cfap54Q8C6S9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cfap54Q8C6S9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cfap54Q8C6S9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cfap54Q8C6S9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cfap54Q8C6S9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Cfap54Q8C6S9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cfap54Q8C6S9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cfap54Q8C6S9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cfap54Q8C6S9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cfap54Q8C6S9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Cfap54Q8C6S9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Cfap54Q8C6S9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cfap54Q8C6S9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Cfap54Q8C6S9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cfap54Q8C6S9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cfap54Q8C6S9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.1■□□□□ 0.81
Cfap54Q8C6S9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cfap54Q8C6S9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.09■□□□□ 0.81
Cfap54Q8C6S9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Cfap54Q8C6S9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cfap54Q8C6S9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cfap54Q8C6S9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cfap54Q8C6S9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cfap54Q8C6S9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cfap54Q8C6S9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cfap54Q8C6S9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Cfap54Q8C6S9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cfap54Q8C6S9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cfap54Q8C6S9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms