Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smco3Q8BQM7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Smco3Q8BQM7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
Smco3Q8BQM7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Smco3Q8BQM7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Smco3Q8BQM7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Smco3Q8BQM7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smco3Q8BQM7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smco3Q8BQM7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smco3Q8BQM7 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.95■□□□□ 0.3
Smco3Q8BQM7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Smco3Q8BQM7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smco3Q8BQM7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.95■□□□□ 0.3
Smco3Q8BQM7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smco3Q8BQM7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smco3Q8BQM7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Smco3Q8BQM7 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.95■□□□□ 0.3
Smco3Q8BQM7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smco3Q8BQM7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smco3Q8BQM7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.94■□□□□ 0.3
Smco3Q8BQM7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smco3Q8BQM7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16.94■□□□□ 0.3
Smco3Q8BQM7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smco3Q8BQM7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smco3Q8BQM7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Smco3Q8BQM7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smco3Q8BQM7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.93■□□□□ 0.3
Smco3Q8BQM7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smco3Q8BQM7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smco3Q8BQM7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smco3Q8BQM7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smco3Q8BQM7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Smco3Q8BQM7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Smco3Q8BQM7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smco3Q8BQM7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smco3Q8BQM7 Gm8503-201ENSMUST00000118131 455 ntBASIC16.92■□□□□ 0.3
Smco3Q8BQM7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC16.92■□□□□ 0.3
Smco3Q8BQM7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Smco3Q8BQM7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smco3Q8BQM7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Smco3Q8BQM7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Smco3Q8BQM7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smco3Q8BQM7 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.92■□□□□ 0.3
Smco3Q8BQM7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Smco3Q8BQM7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Smco3Q8BQM7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smco3Q8BQM7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smco3Q8BQM7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smco3Q8BQM7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smco3Q8BQM7 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smco3Q8BQM7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Smco3Q8BQM7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smco3Q8BQM7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Smco3Q8BQM7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smco3Q8BQM7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smco3Q8BQM7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smco3Q8BQM7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Smco3Q8BQM7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smco3Q8BQM7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smco3Q8BQM7 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smco3Q8BQM7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smco3Q8BQM7 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Smco3Q8BQM7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Smco3Q8BQM7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smco3Q8BQM7 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.89■□□□□ 0.29
Smco3Q8BQM7 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smco3Q8BQM7 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.89■□□□□ 0.29
Smco3Q8BQM7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smco3Q8BQM7 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.89■□□□□ 0.29
Smco3Q8BQM7 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smco3Q8BQM7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smco3Q8BQM7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smco3Q8BQM7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Smco3Q8BQM7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smco3Q8BQM7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smco3Q8BQM7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.88■□□□□ 0.29
Smco3Q8BQM7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smco3Q8BQM7 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smco3Q8BQM7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smco3Q8BQM7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smco3Q8BQM7 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smco3Q8BQM7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smco3Q8BQM7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smco3Q8BQM7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smco3Q8BQM7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smco3Q8BQM7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smco3Q8BQM7 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smco3Q8BQM7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smco3Q8BQM7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smco3Q8BQM7 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.87■□□□□ 0.29
Smco3Q8BQM7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smco3Q8BQM7 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smco3Q8BQM7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smco3Q8BQM7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smco3Q8BQM7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
Smco3Q8BQM7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Smco3Q8BQM7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smco3Q8BQM7 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smco3Q8BQM7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.86■□□□□ 0.29
Smco3Q8BQM7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms