Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.08■□□□□ 0.97
Lsmem1Q3UQS2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lsmem1Q3UQS2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lsmem1Q3UQS2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Lsmem1Q3UQS2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lsmem1Q3UQS2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lsmem1Q3UQS2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lsmem1Q3UQS2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lsmem1Q3UQS2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.07■□□□□ 0.96
Lsmem1Q3UQS2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Lsmem1Q3UQS2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lsmem1Q3UQS2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Lsmem1Q3UQS2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lsmem1Q3UQS2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lsmem1Q3UQS2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lsmem1Q3UQS2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lsmem1Q3UQS2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lsmem1Q3UQS2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lsmem1Q3UQS2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lsmem1Q3UQS2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
Lsmem1Q3UQS2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lsmem1Q3UQS2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.05■□□□□ 0.96
Lsmem1Q3UQS2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lsmem1Q3UQS2 Gm22238-201ENSMUST00000175222 88 ntBASIC21.05■□□□□ 0.96
Lsmem1Q3UQS2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lsmem1Q3UQS2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lsmem1Q3UQS2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.05■□□□□ 0.96
Lsmem1Q3UQS2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lsmem1Q3UQS2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lsmem1Q3UQS2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.04■□□□□ 0.96
Lsmem1Q3UQS2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.04■□□□□ 0.96
Lsmem1Q3UQS2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lsmem1Q3UQS2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Lsmem1Q3UQS2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lsmem1Q3UQS2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.04■□□□□ 0.96
Lsmem1Q3UQS2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lsmem1Q3UQS2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lsmem1Q3UQS2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lsmem1Q3UQS2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.03■□□□□ 0.96
Lsmem1Q3UQS2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lsmem1Q3UQS2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.03■□□□□ 0.96
Lsmem1Q3UQS2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.03■□□□□ 0.96
Lsmem1Q3UQS2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lsmem1Q3UQS2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lsmem1Q3UQS2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Lsmem1Q3UQS2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lsmem1Q3UQS2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lsmem1Q3UQS2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.02■□□□□ 0.96
Lsmem1Q3UQS2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Lsmem1Q3UQS2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Lsmem1Q3UQS2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lsmem1Q3UQS2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lsmem1Q3UQS2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.01■□□□□ 0.95
Lsmem1Q3UQS2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21■□□□□ 0.95
Lsmem1Q3UQS2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Lsmem1Q3UQS2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21■□□□□ 0.95
Lsmem1Q3UQS2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lsmem1Q3UQS2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lsmem1Q3UQS2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lsmem1Q3UQS2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Lsmem1Q3UQS2 Gm7143-201ENSMUST00000222811 859 ntBASIC20.99■□□□□ 0.95
Lsmem1Q3UQS2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Lsmem1Q3UQS2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lsmem1Q3UQS2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lsmem1Q3UQS2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lsmem1Q3UQS2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lsmem1Q3UQS2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lsmem1Q3UQS2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lsmem1Q3UQS2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lsmem1Q3UQS2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Lsmem1Q3UQS2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lsmem1Q3UQS2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Lsmem1Q3UQS2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lsmem1Q3UQS2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lsmem1Q3UQS2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lsmem1Q3UQS2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lsmem1Q3UQS2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lsmem1Q3UQS2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lsmem1Q3UQS2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Lsmem1Q3UQS2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.97■□□□□ 0.95
Lsmem1Q3UQS2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Lsmem1Q3UQS2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lsmem1Q3UQS2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.97■□□□□ 0.95
Lsmem1Q3UQS2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lsmem1Q3UQS2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lsmem1Q3UQS2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lsmem1Q3UQS2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lsmem1Q3UQS2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lsmem1Q3UQS2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lsmem1Q3UQS2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.96■□□□□ 0.95
Lsmem1Q3UQS2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lsmem1Q3UQS2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lsmem1Q3UQS2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lsmem1Q3UQS2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lsmem1Q3UQS2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lsmem1Q3UQS2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lsmem1Q3UQS2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.95■□□□□ 0.94
Lsmem1Q3UQS2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lsmem1Q3UQS2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Lsmem1Q3UQS2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms