Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SSNA1O43805 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
SSNA1O43805 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.58■□□□□ 0.72
SSNA1O43805 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.58■□□□□ 0.72
SSNA1O43805 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SSNA1O43805 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.58■□□□□ 0.72
SSNA1O43805 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.57■□□□□ 0.72
SSNA1O43805 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SSNA1O43805 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.57■□□□□ 0.72
SSNA1O43805 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSNA1O43805 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.57■□□□□ 0.72
SSNA1O43805 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.57■□□□□ 0.72
SSNA1O43805 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SSNA1O43805 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSNA1O43805 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.57■□□□□ 0.72
SSNA1O43805 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.57■□□□□ 0.72
SSNA1O43805 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSNA1O43805 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSNA1O43805 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SSNA1O43805 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSNA1O43805 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.56■□□□□ 0.72
SSNA1O43805 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SSNA1O43805 MIR762-201ENST00000390236 83 ntBASIC19.56■□□□□ 0.72
SSNA1O43805 FOXO3B-201ENST00000395675 1928 ntBASIC19.56■□□□□ 0.72
SSNA1O43805 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSNA1O43805 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSNA1O43805 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSNA1O43805 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSNA1O43805 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SSNA1O43805 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SSNA1O43805 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSNA1O43805 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.55■□□□□ 0.72
SSNA1O43805 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SSNA1O43805 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SSNA1O43805 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSNA1O43805 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSNA1O43805 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSNA1O43805 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.55■□□□□ 0.72
SSNA1O43805 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSNA1O43805 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
SSNA1O43805 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
SSNA1O43805 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSNA1O43805 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
SSNA1O43805 MIR6090-201ENST00000622481 60 ntBASIC19.54■□□□□ 0.72
SSNA1O43805 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSNA1O43805 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSNA1O43805 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SSNA1O43805 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSNA1O43805 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSNA1O43805 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSNA1O43805 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SSNA1O43805 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSNA1O43805 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SSNA1O43805 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SSNA1O43805 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSNA1O43805 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SSNA1O43805 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSNA1O43805 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSNA1O43805 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSNA1O43805 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.53■□□□□ 0.72
SSNA1O43805 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SSNA1O43805 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SSNA1O43805 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
SSNA1O43805 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSNA1O43805 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.52■□□□□ 0.72
SSNA1O43805 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SSNA1O43805 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SSNA1O43805 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SSNA1O43805 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.52■□□□□ 0.72
SSNA1O43805 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSNA1O43805 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SSNA1O43805 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSNA1O43805 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSNA1O43805 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SSNA1O43805 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.52■□□□□ 0.72
SSNA1O43805 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSNA1O43805 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
SSNA1O43805 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SSNA1O43805 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SSNA1O43805 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SSNA1O43805 ECEL1P1-201ENST00000373592 1742 ntBASIC19.51■□□□□ 0.71
SSNA1O43805 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSNA1O43805 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SSNA1O43805 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSNA1O43805 AL137060.1-201ENST00000618151 2648 ntBASIC19.51■□□□□ 0.71
SSNA1O43805 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSNA1O43805 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.51■□□□□ 0.71
SSNA1O43805 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SSNA1O43805 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSNA1O43805 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.51■□□□□ 0.71
SSNA1O43805 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSNA1O43805 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.51■□□□□ 0.71
SSNA1O43805 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SSNA1O43805 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSNA1O43805 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SSNA1O43805 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSNA1O43805 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSNA1O43805 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSNA1O43805 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SSNA1O43805 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms