Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shank1D3YZU1 Spcs1-204ENSMUST00000226782 949 ntBASIC18.57■□□□□ 0.56
Shank1D3YZU1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Shank1D3YZU1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shank1D3YZU1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Shank1D3YZU1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shank1D3YZU1 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.56■□□□□ 0.56
Shank1D3YZU1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shank1D3YZU1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.56■□□□□ 0.56
Shank1D3YZU1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shank1D3YZU1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Shank1D3YZU1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Shank1D3YZU1 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.56■□□□□ 0.56
Shank1D3YZU1 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.56■□□□□ 0.56
Shank1D3YZU1 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.56■□□□□ 0.56
Shank1D3YZU1 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.56■□□□□ 0.56
Shank1D3YZU1 Gm42569-201ENSMUST00000200539 472 ntBASIC18.56■□□□□ 0.56
Shank1D3YZU1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shank1D3YZU1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shank1D3YZU1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
Shank1D3YZU1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.55■□□□□ 0.56
Shank1D3YZU1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Shank1D3YZU1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shank1D3YZU1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.55■□□□□ 0.56
Shank1D3YZU1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shank1D3YZU1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Shank1D3YZU1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Shank1D3YZU1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shank1D3YZU1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shank1D3YZU1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Shank1D3YZU1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shank1D3YZU1 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.54■□□□□ 0.56
Shank1D3YZU1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.54■□□□□ 0.56
Shank1D3YZU1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Shank1D3YZU1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Shank1D3YZU1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Shank1D3YZU1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shank1D3YZU1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.53■□□□□ 0.56
Shank1D3YZU1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shank1D3YZU1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.53■□□□□ 0.56
Shank1D3YZU1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Shank1D3YZU1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shank1D3YZU1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shank1D3YZU1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shank1D3YZU1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Shank1D3YZU1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Shank1D3YZU1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shank1D3YZU1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shank1D3YZU1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shank1D3YZU1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shank1D3YZU1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Shank1D3YZU1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Shank1D3YZU1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shank1D3YZU1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Shank1D3YZU1 Gm10033-202ENSMUST00000211874 928 ntBASIC18.51■□□□□ 0.55
Shank1D3YZU1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shank1D3YZU1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shank1D3YZU1 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.51■□□□□ 0.55
Shank1D3YZU1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Shank1D3YZU1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.5■□□□□ 0.55
Shank1D3YZU1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shank1D3YZU1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shank1D3YZU1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Shank1D3YZU1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Shank1D3YZU1 Gm42642-201ENSMUST00000200683 355 ntBASIC18.5■□□□□ 0.55
Shank1D3YZU1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Shank1D3YZU1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shank1D3YZU1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Shank1D3YZU1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Shank1D3YZU1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shank1D3YZU1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.49■□□□□ 0.55
Shank1D3YZU1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Shank1D3YZU1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shank1D3YZU1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shank1D3YZU1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shank1D3YZU1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shank1D3YZU1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shank1D3YZU1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Shank1D3YZU1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shank1D3YZU1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shank1D3YZU1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shank1D3YZU1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Shank1D3YZU1 Gm40848-201ENSMUST00000221998 324 ntBASIC18.48■□□□□ 0.55
Shank1D3YZU1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shank1D3YZU1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shank1D3YZU1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shank1D3YZU1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shank1D3YZU1 Gm7143-201ENSMUST00000222811 859 ntBASIC18.48■□□□□ 0.55
Shank1D3YZU1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shank1D3YZU1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Shank1D3YZU1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shank1D3YZU1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shank1D3YZU1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Shank1D3YZU1 Gm43060-201ENSMUST00000200621 289 ntBASIC18.47■□□□□ 0.55
Shank1D3YZU1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shank1D3YZU1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Shank1D3YZU1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shank1D3YZU1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.47■□□□□ 0.55
Shank1D3YZU1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.47■□□□□ 0.55
Shank1D3YZU1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms