Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9d-4A0A0G2JG37 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trav9d-4A0A0G2JG37 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav9d-4A0A0G2JG37 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9d-4A0A0G2JG37 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav9d-4A0A0G2JG37 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9d-4A0A0G2JG37 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9d-4A0A0G2JG37 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav9d-4A0A0G2JG37 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9d-4A0A0G2JG37 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9d-4A0A0G2JG37 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9d-4A0A0G2JG37 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9d-4A0A0G2JG37 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav9d-4A0A0G2JG37 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9d-4A0A0G2JG37 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9d-4A0A0G2JG37 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9d-4A0A0G2JG37 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9d-4A0A0G2JG37 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9d-4A0A0G2JG37 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9d-4A0A0G2JG37 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav9d-4A0A0G2JG37 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
Trav9d-4A0A0G2JG37 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9d-4A0A0G2JG37 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9d-4A0A0G2JG37 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Trav9d-4A0A0G2JG37 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9d-4A0A0G2JG37 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav9d-4A0A0G2JG37 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9d-4A0A0G2JG37 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9d-4A0A0G2JG37 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9d-4A0A0G2JG37 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav9d-4A0A0G2JG37 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC14.07□□□□□ -0.16
Trav9d-4A0A0G2JG37 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9d-4A0A0G2JG37 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9d-4A0A0G2JG37 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav9d-4A0A0G2JG37 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC14.07□□□□□ -0.16
Trav9d-4A0A0G2JG37 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav9d-4A0A0G2JG37 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9d-4A0A0G2JG37 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9d-4A0A0G2JG37 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav9d-4A0A0G2JG37 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav9d-4A0A0G2JG37 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav9d-4A0A0G2JG37 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav9d-4A0A0G2JG37 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9d-4A0A0G2JG37 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9d-4A0A0G2JG37 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9d-4A0A0G2JG37 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9d-4A0A0G2JG37 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9d-4A0A0G2JG37 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9d-4A0A0G2JG37 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9d-4A0A0G2JG37 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9d-4A0A0G2JG37 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9d-4A0A0G2JG37 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC14.06□□□□□ -0.16
Trav9d-4A0A0G2JG37 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9d-4A0A0G2JG37 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9d-4A0A0G2JG37 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9d-4A0A0G2JG37 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9d-4A0A0G2JG37 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9d-4A0A0G2JG37 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav9d-4A0A0G2JG37 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav9d-4A0A0G2JG37 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9d-4A0A0G2JG37 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9d-4A0A0G2JG37 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC14.05□□□□□ -0.16
Trav9d-4A0A0G2JG37 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
Trav9d-4A0A0G2JG37 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9d-4A0A0G2JG37 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9d-4A0A0G2JG37 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav9d-4A0A0G2JG37 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9d-4A0A0G2JG37 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9d-4A0A0G2JG37 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9d-4A0A0G2JG37 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9d-4A0A0G2JG37 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9d-4A0A0G2JG37 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9d-4A0A0G2JG37 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav9d-4A0A0G2JG37 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav9d-4A0A0G2JG37 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9d-4A0A0G2JG37 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9d-4A0A0G2JG37 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9d-4A0A0G2JG37 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9d-4A0A0G2JG37 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav9d-4A0A0G2JG37 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9d-4A0A0G2JG37 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9d-4A0A0G2JG37 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9d-4A0A0G2JG37 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav9d-4A0A0G2JG37 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.03□□□□□ -0.16
Trav9d-4A0A0G2JG37 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.03□□□□□ -0.16
Trav9d-4A0A0G2JG37 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9d-4A0A0G2JG37 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9d-4A0A0G2JG37 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav9d-4A0A0G2JG37 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9d-4A0A0G2JG37 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9d-4A0A0G2JG37 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9d-4A0A0G2JG37 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9d-4A0A0G2JG37 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Trav9d-4A0A0G2JG37 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav9d-4A0A0G2JG37 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav9d-4A0A0G2JG37 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC14.02□□□□□ -0.17
Trav9d-4A0A0G2JG37 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav9d-4A0A0G2JG37 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav9d-4A0A0G2JG37 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Trav9d-4A0A0G2JG37 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms