Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-47A0A0A6YY41 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-47A0A0A6YY41 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.05■□□□□ 0.32
Ighv1-47A0A0A6YY41 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-47A0A0A6YY41 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-47A0A0A6YY41 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-47A0A0A6YY41 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.04■□□□□ 0.32
Ighv1-47A0A0A6YY41 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.04■□□□□ 0.32
Ighv1-47A0A0A6YY41 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ighv1-47A0A0A6YY41 Gm45444-201ENSMUST00000211394 898 ntBASIC17.04■□□□□ 0.32
Ighv1-47A0A0A6YY41 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-47A0A0A6YY41 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-47A0A0A6YY41 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ighv1-47A0A0A6YY41 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-47A0A0A6YY41 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-47A0A0A6YY41 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Ighv1-47A0A0A6YY41 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-47A0A0A6YY41 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ighv1-47A0A0A6YY41 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ighv1-47A0A0A6YY41 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ighv1-47A0A0A6YY41 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-47A0A0A6YY41 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-47A0A0A6YY41 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ighv1-47A0A0A6YY41 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-47A0A0A6YY41 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ighv1-47A0A0A6YY41 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-47A0A0A6YY41 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
Ighv1-47A0A0A6YY41 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ighv1-47A0A0A6YY41 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Ighv1-47A0A0A6YY41 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-47A0A0A6YY41 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-47A0A0A6YY41 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-47A0A0A6YY41 Gm5921-201ENSMUST00000075898 882 ntBASIC17.02■□□□□ 0.32
Ighv1-47A0A0A6YY41 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ighv1-47A0A0A6YY41 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Ighv1-47A0A0A6YY41 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ighv1-47A0A0A6YY41 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ighv1-47A0A0A6YY41 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Ighv1-47A0A0A6YY41 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.01■□□□□ 0.31
Ighv1-47A0A0A6YY41 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-47A0A0A6YY41 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.01■□□□□ 0.31
Ighv1-47A0A0A6YY41 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ighv1-47A0A0A6YY41 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-47A0A0A6YY41 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.01■□□□□ 0.31
Ighv1-47A0A0A6YY41 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-47A0A0A6YY41 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-47A0A0A6YY41 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-47A0A0A6YY41 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-47A0A0A6YY41 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.01■□□□□ 0.31
Ighv1-47A0A0A6YY41 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-47A0A0A6YY41 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-47A0A0A6YY41 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-47A0A0A6YY41 Gm44949-201ENSMUST00000206423 1450 ntBASIC17■□□□□ 0.31
Ighv1-47A0A0A6YY41 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-47A0A0A6YY41 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-47A0A0A6YY41 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-47A0A0A6YY41 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-47A0A0A6YY41 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ighv1-47A0A0A6YY41 Gm11847-201ENSMUST00000125165 1119 ntBASIC17■□□□□ 0.31
Ighv1-47A0A0A6YY41 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17■□□□□ 0.31
Ighv1-47A0A0A6YY41 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-47A0A0A6YY41 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-47A0A0A6YY41 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Ighv1-47A0A0A6YY41 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-47A0A0A6YY41 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-47A0A0A6YY41 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-47A0A0A6YY41 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-47A0A0A6YY41 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Ighv1-47A0A0A6YY41 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ighv1-47A0A0A6YY41 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ighv1-47A0A0A6YY41 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-47A0A0A6YY41 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-47A0A0A6YY41 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-47A0A0A6YY41 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.99■□□□□ 0.31
Ighv1-47A0A0A6YY41 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.99■□□□□ 0.31
Ighv1-47A0A0A6YY41 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.99■□□□□ 0.31
Ighv1-47A0A0A6YY41 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-47A0A0A6YY41 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.99■□□□□ 0.31
Ighv1-47A0A0A6YY41 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-47A0A0A6YY41 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-47A0A0A6YY41 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-47A0A0A6YY41 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-47A0A0A6YY41 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Ighv1-47A0A0A6YY41 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-47A0A0A6YY41 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-47A0A0A6YY41 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-47A0A0A6YY41 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-47A0A0A6YY41 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-47A0A0A6YY41 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-47A0A0A6YY41 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-47A0A0A6YY41 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-47A0A0A6YY41 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-47A0A0A6YY41 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.97■□□□□ 0.31
Ighv1-47A0A0A6YY41 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-47A0A0A6YY41 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-47A0A0A6YY41 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-47A0A0A6YY41 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-47A0A0A6YY41 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-47A0A0A6YY41 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-47A0A0A6YY41 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms