Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Trav3-3Q5R1C3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.96
Trav3-3Q5R1C3 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trav3-3Q5R1C3 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trav3-3Q5R1C3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
Trav3-3Q5R1C3 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trav3-3Q5R1C3 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
Trav3-3Q5R1C3 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trav3-3Q5R1C3 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Gm21854-201ENSMUST00000179901 471 ntBASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 AC135669.1-202ENSMUST00000216742 540 ntBASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Gm19220-201ENSMUST00000222682 803 ntBASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 AC096628.2-201ENSMUST00000225443 1413 ntBASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Gm43760-201ENSMUST00000202120 3015 ntBASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav3-3Q5R1C3 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Gm26464-201ENSMUST00000157094 305 ntBASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Gm5354-201ENSMUST00000182417 973 ntBASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Gm38223-201ENSMUST00000194484 695 ntBASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms