Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 AP006547.1-201ENST00000563435 692 ntBASIC14.15□□□□□ -0.14
EFNA3P52797 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.15□□□□□ -0.14
EFNA3P52797 AC138466.3-201ENST00000619983 221 ntBASIC14.15□□□□□ -0.14
EFNA3P52797 MIR6799-201ENST00000620297 69 ntBASIC14.15□□□□□ -0.14
EFNA3P52797 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNA3P52797 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNA3P52797 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
EFNA3P52797 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNA3P52797 AC023090.2-201ENST00000625182 2110 ntBASIC14.15□□□□□ -0.14
EFNA3P52797 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNA3P52797 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
EFNA3P52797 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
EFNA3P52797 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.15□□□□□ -0.14
EFNA3P52797 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
EFNA3P52797 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNA3P52797 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
EFNA3P52797 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.15□□□□□ -0.14
EFNA3P52797 LINC00528-201ENST00000600723 2160 ntBASIC14.15□□□□□ -0.15
EFNA3P52797 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNA3P52797 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNA3P52797 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.14□□□□□ -0.15
EFNA3P52797 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNA3P52797 AC126177.1-201ENST00000547829 2218 ntBASIC14.14□□□□□ -0.15
EFNA3P52797 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNA3P52797 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EFNA3P52797 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNA3P52797 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNA3P52797 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.14□□□□□ -0.15
EFNA3P52797 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.14□□□□□ -0.15
EFNA3P52797 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
EFNA3P52797 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNA3P52797 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
EFNA3P52797 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.14□□□□□ -0.15
EFNA3P52797 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.14□□□□□ -0.15
EFNA3P52797 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.14□□□□□ -0.15
EFNA3P52797 ACTBP11-201ENST00000436287 1126 ntBASIC14.14□□□□□ -0.15
EFNA3P52797 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNA3P52797 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.14□□□□□ -0.15
EFNA3P52797 GOLGA2P4-201ENST00000441462 777 ntBASIC14.14□□□□□ -0.15
EFNA3P52797 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.14□□□□□ -0.15
EFNA3P52797 AC108725.1-201ENST00000495472 409 ntBASIC14.14□□□□□ -0.15
EFNA3P52797 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.14□□□□□ -0.15
EFNA3P52797 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
EFNA3P52797 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.14□□□□□ -0.15
EFNA3P52797 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.14□□□□□ -0.15
EFNA3P52797 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.14□□□□□ -0.15
EFNA3P52797 AC010328.2-201ENST00000597698 1111 ntBASIC14.14□□□□□ -0.15
EFNA3P52797 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.14□□□□□ -0.15
EFNA3P52797 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.14□□□□□ -0.15
EFNA3P52797 OR10B1P-201ENST00000601666 907 ntBASIC14.14□□□□□ -0.15
EFNA3P52797 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.14□□□□□ -0.15
EFNA3P52797 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNA3P52797 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNA3P52797 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNA3P52797 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.14□□□□□ -0.15
EFNA3P52797 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNA3P52797 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNA3P52797 AC009093.2-202ENST00000620513 2079 ntBASIC14.14□□□□□ -0.15
EFNA3P52797 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
EFNA3P52797 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.14□□□□□ -0.15
EFNA3P52797 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EFNA3P52797 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNA3P52797 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
EFNA3P52797 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNA3P52797 AL354989.2-201ENST00000435838 1540 ntBASIC14.14□□□□□ -0.15
EFNA3P52797 AC144831.1-201ENST00000573312 2656 ntBASIC14.14□□□□□ -0.15
EFNA3P52797 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNA3P52797 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.14□□□□□ -0.15
EFNA3P52797 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNA3P52797 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.14□□□□□ -0.15
EFNA3P52797 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.14□□□□□ -0.15
EFNA3P52797 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNA3P52797 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNA3P52797 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EFNA3P52797 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNA3P52797 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.13□□□□□ -0.15
EFNA3P52797 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.13□□□□□ -0.15
EFNA3P52797 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.13□□□□□ -0.15
EFNA3P52797 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EFNA3P52797 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.13□□□□□ -0.15
EFNA3P52797 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EFNA3P52797 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.13□□□□□ -0.15
EFNA3P52797 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EFNA3P52797 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNA3P52797 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNA3P52797 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNA3P52797 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNA3P52797 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.13□□□□□ -0.15
EFNA3P52797 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EFNA3P52797 MESTP3-201ENST00000503460 968 ntBASIC14.13□□□□□ -0.15
EFNA3P52797 AC023310.1-201ENST00000554836 735 ntBASIC14.13□□□□□ -0.15
EFNA3P52797 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.13□□□□□ -0.15
EFNA3P52797 RN7SL560P-201ENST00000577943 264 ntBASIC14.13□□□□□ -0.15
EFNA3P52797 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EFNA3P52797 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.13□□□□□ -0.15
EFNA3P52797 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.13□□□□□ -0.15
EFNA3P52797 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNA3P52797 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNA3P52797 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNA3P52797 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms