Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC6A12P48065 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC6A12P48065 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC6A12P48065 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC6A12P48065 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC6A12P48065 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC6A12P48065 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SLC6A12P48065 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SLC6A12P48065 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC6A12P48065 AC007969.1-201ENST00000433675 447 ntBASIC14.55□□□□□ -0.08
SLC6A12P48065 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC6A12P48065 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
SLC6A12P48065 FO681548.1-201ENST00000455617 1132 ntBASIC14.55□□□□□ -0.08
SLC6A12P48065 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.55□□□□□ -0.08
SLC6A12P48065 AC068587.3-201ENST00000526613 355 ntBASIC14.55□□□□□ -0.08
SLC6A12P48065 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC6A12P48065 PTP4A1P2-201ENST00000546033 454 ntBASIC14.55□□□□□ -0.08
SLC6A12P48065 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC6A12P48065 AC145423.3-201ENST00000615987 467 ntBASIC14.55□□□□□ -0.08
SLC6A12P48065 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SLC6A12P48065 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC6A12P48065 AL138725.1-201ENST00000407347 1314 ntBASIC14.55□□□□□ -0.08
SLC6A12P48065 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SLC6A12P48065 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SLC6A12P48065 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC6A12P48065 AC068418.2-201ENST00000577309 3703 ntBASIC14.55□□□□□ -0.08
SLC6A12P48065 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC6A12P48065 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC6A12P48065 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC6A12P48065 AL138709.1-201ENST00000614840 1693 ntBASIC14.55□□□□□ -0.08
SLC6A12P48065 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC6A12P48065 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SLC6A12P48065 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC6A12P48065 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SLC6A12P48065 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC6A12P48065 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A12P48065 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A12P48065 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A12P48065 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A12P48065 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SLC6A12P48065 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
SLC6A12P48065 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A12P48065 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A12P48065 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A12P48065 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A12P48065 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A12P48065 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A12P48065 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A12P48065 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A12P48065 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SLC6A12P48065 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.54□□□□□ -0.08
SLC6A12P48065 RN7SL837P-201ENST00000463010 287 ntBASIC14.54□□□□□ -0.08
SLC6A12P48065 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.54□□□□□ -0.08
SLC6A12P48065 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SLC6A12P48065 TDH-203ENST00000531764 1110 ntBASIC14.54□□□□□ -0.08
SLC6A12P48065 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
SLC6A12P48065 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.54□□□□□ -0.08
SLC6A12P48065 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC6A12P48065 LINC02084-201ENST00000606069 1096 ntBASIC14.54□□□□□ -0.08
SLC6A12P48065 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.54□□□□□ -0.08
SLC6A12P48065 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A12P48065 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SLC6A12P48065 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SLC6A12P48065 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A12P48065 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A12P48065 AC015802.1-201ENST00000588104 1449 ntBASIC14.54□□□□□ -0.08
SLC6A12P48065 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A12P48065 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.54□□□□□ -0.08
SLC6A12P48065 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.54□□□□□ -0.08
SLC6A12P48065 SALL4P5-201ENST00000419001 1760 ntBASIC14.54□□□□□ -0.08
SLC6A12P48065 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A12P48065 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SLC6A12P48065 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A12P48065 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A12P48065 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SLC6A12P48065 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC6A12P48065 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SLC6A12P48065 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A12P48065 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A12P48065 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A12P48065 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A12P48065 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A12P48065 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A12P48065 INTS4P1-203ENST00000641008 3683 ntBASIC14.53□□□□□ -0.08
SLC6A12P48065 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A12P48065 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A12P48065 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SLC6A12P48065 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC6A12P48065 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A12P48065 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC6A12P48065 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A12P48065 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A12P48065 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A12P48065 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A12P48065 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC6A12P48065 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.53□□□□□ -0.08
SLC6A12P48065 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
SLC6A12P48065 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A12P48065 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A12P48065 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms