Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.12□□□□□ -0.15
PRKCAP17252 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.12□□□□□ -0.15
PRKCAP17252 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.12□□□□□ -0.15
PRKCAP17252 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.12□□□□□ -0.15
PRKCAP17252 AC036164.1-201ENST00000570544 333 ntBASIC14.12□□□□□ -0.15
PRKCAP17252 MIR4745-201ENST00000577608 62 ntBASIC14.12□□□□□ -0.15
PRKCAP17252 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PRKCAP17252 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PRKCAP17252 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PRKCAP17252 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PRKCAP17252 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PRKCAP17252 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PRKCAP17252 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PRKCAP17252 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PRKCAP17252 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
PRKCAP17252 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.12□□□□□ -0.15
PRKCAP17252 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PRKCAP17252 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PRKCAP17252 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PRKCAP17252 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PRKCAP17252 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PRKCAP17252 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PRKCAP17252 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
PRKCAP17252 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PRKCAP17252 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PRKCAP17252 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PRKCAP17252 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PRKCAP17252 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.11□□□□□ -0.15
PRKCAP17252 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PRKCAP17252 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PRKCAP17252 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PRKCAP17252 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.11□□□□□ -0.15
PRKCAP17252 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PRKCAP17252 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PRKCAP17252 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
PRKCAP17252 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.11□□□□□ -0.15
PRKCAP17252 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.11□□□□□ -0.15
PRKCAP17252 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.11□□□□□ -0.15
PRKCAP17252 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PRKCAP17252 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.11□□□□□ -0.15
PRKCAP17252 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PRKCAP17252 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PRKCAP17252 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PRKCAP17252 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
PRKCAP17252 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.11□□□□□ -0.15
PRKCAP17252 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.11□□□□□ -0.15
PRKCAP17252 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PRKCAP17252 AC055876.2-201ENST00000531834 546 ntBASIC14.11□□□□□ -0.15
PRKCAP17252 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.11□□□□□ -0.15
PRKCAP17252 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PRKCAP17252 RRP7BP-205ENST00000566851 833 ntBASIC14.11□□□□□ -0.15
PRKCAP17252 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.11□□□□□ -0.15
PRKCAP17252 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.11□□□□□ -0.15
PRKCAP17252 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.11□□□□□ -0.15
PRKCAP17252 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PRKCAP17252 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.11□□□□□ -0.15
PRKCAP17252 AC004233.3-201ENST00000607794 1269 ntBASIC14.11□□□□□ -0.15
PRKCAP17252 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
PRKCAP17252 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PRKCAP17252 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PRKCAP17252 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
PRKCAP17252 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PRKCAP17252 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.11□□□□□ -0.15
PRKCAP17252 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PRKCAP17252 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PRKCAP17252 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PRKCAP17252 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PRKCAP17252 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.11□□□□□ -0.15
PRKCAP17252 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PRKCAP17252 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PRKCAP17252 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PRKCAP17252 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PRKCAP17252 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.1□□□□□ -0.15
PRKCAP17252 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PRKCAP17252 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
PRKCAP17252 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PRKCAP17252 SLC7A15P-201ENST00000424028 1363 ntBASIC14.1□□□□□ -0.15
PRKCAP17252 KRT8P44-201ENST00000441609 1350 ntBASIC14.1□□□□□ -0.15
PRKCAP17252 AL390755.1-201ENST00000623716 2027 ntBASIC14.1□□□□□ -0.15
PRKCAP17252 Z82170.1-201ENST00000625081 3192 ntBASIC14.1□□□□□ -0.15
PRKCAP17252 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PRKCAP17252 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PRKCAP17252 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PRKCAP17252 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PRKCAP17252 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.1□□□□□ -0.15
PRKCAP17252 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PRKCAP17252 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PRKCAP17252 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.1□□□□□ -0.15
PRKCAP17252 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PRKCAP17252 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PRKCAP17252 SBF1P1-201ENST00000444527 5631 ntBASIC14.1□□□□□ -0.15
PRKCAP17252 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
PRKCAP17252 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PRKCAP17252 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.1□□□□□ -0.15
PRKCAP17252 DFFBP1-201ENST00000433250 979 ntBASIC14.1□□□□□ -0.15
PRKCAP17252 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.1□□□□□ -0.15
PRKCAP17252 AL132655.2-201ENST00000596276 594 ntBASIC14.1□□□□□ -0.15
PRKCAP17252 AC025181.2-201ENST00000606994 802 ntBASIC14.1□□□□□ -0.15
PRKCAP17252 AC099568.2-201ENST00000609194 695 ntBASIC14.1□□□□□ -0.15
PRKCAP17252 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms