Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.36□□□□□ -0.43
Trove2O08848 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Trove2O08848 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trove2O08848 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.36□□□□□ -0.43
Trove2O08848 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trove2O08848 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trove2O08848 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trove2O08848 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trove2O08848 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trove2O08848 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trove2O08848 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trove2O08848 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trove2O08848 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trove2O08848 Gm12363-201ENSMUST00000122250 668 ntBASIC12.36□□□□□ -0.43
Trove2O08848 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.36□□□□□ -0.43
Trove2O08848 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trove2O08848 Gm7029-201ENSMUST00000173226 450 ntBASIC12.36□□□□□ -0.43
Trove2O08848 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.36□□□□□ -0.43
Trove2O08848 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trove2O08848 Gm26927-201ENSMUST00000182385 965 ntBASIC12.36□□□□□ -0.43
Trove2O08848 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trove2O08848 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trove2O08848 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trove2O08848 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trove2O08848 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trove2O08848 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trove2O08848 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Trove2O08848 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trove2O08848 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.36□□□□□ -0.43
Trove2O08848 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trove2O08848 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trove2O08848 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.36□□□□□ -0.43
Trove2O08848 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.36□□□□□ -0.43
Trove2O08848 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trove2O08848 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.36□□□□□ -0.43
Trove2O08848 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Trove2O08848 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trove2O08848 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trove2O08848 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trove2O08848 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trove2O08848 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trove2O08848 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trove2O08848 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trove2O08848 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.35□□□□□ -0.43
Trove2O08848 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trove2O08848 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.35□□□□□ -0.43
Trove2O08848 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trove2O08848 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trove2O08848 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Trove2O08848 Gm16177-201ENSMUST00000120728 718 ntBASIC12.35□□□□□ -0.43
Trove2O08848 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trove2O08848 Gm1335-201ENSMUST00000121653 386 ntBASIC12.35□□□□□ -0.43
Trove2O08848 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.35□□□□□ -0.43
Trove2O08848 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trove2O08848 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.35□□□□□ -0.43
Trove2O08848 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.35□□□□□ -0.43
Trove2O08848 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.35□□□□□ -0.43
Trove2O08848 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.35□□□□□ -0.43
Trove2O08848 Gm40466-201ENSMUST00000212174 422 ntBASIC12.35□□□□□ -0.43
Trove2O08848 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trove2O08848 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trove2O08848 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trove2O08848 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trove2O08848 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.35□□□□□ -0.43
Trove2O08848 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trove2O08848 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trove2O08848 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trove2O08848 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trove2O08848 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trove2O08848 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.35□□□□□ -0.43
Trove2O08848 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.35□□□□□ -0.43
Trove2O08848 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trove2O08848 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trove2O08848 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.35□□□□□ -0.43
Trove2O08848 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trove2O08848 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trove2O08848 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trove2O08848 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trove2O08848 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trove2O08848 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trove2O08848 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trove2O08848 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trove2O08848 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trove2O08848 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.34□□□□□ -0.43
Trove2O08848 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trove2O08848 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trove2O08848 Snord83b-201ENSMUST00000104546 94 ntBASIC12.34□□□□□ -0.43
Trove2O08848 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.34□□□□□ -0.43
Trove2O08848 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trove2O08848 Gm15824-201ENSMUST00000119516 955 ntBASIC12.34□□□□□ -0.43
Trove2O08848 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.34□□□□□ -0.43
Trove2O08848 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.34□□□□□ -0.43
Trove2O08848 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trove2O08848 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trove2O08848 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trove2O08848 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trove2O08848 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trove2O08848 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trove2O08848 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trove2O08848 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms