Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 AC078819.1-201ENST00000547454 765 ntBASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 AC012085.1-201ENST00000548270 765 ntBASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 GPR182-203ENST00000622922 591 ntBASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 AC126365.1-201ENST00000578585 1514 ntBASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 AC126177.1-201ENST00000547829 2218 ntBASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 AC013268.4-201ENST00000637413 2228 ntBASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 RN7SL560P-201ENST00000577943 264 ntBASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 AC008687.7-202ENST00000637404 953 ntBASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 AL109954.1-202ENST00000564051 2148 ntBASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA2E9PIF3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 LRRC59-203ENST00000576448 1531 ntBASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 NUS1P3-201ENST00000423502 862 ntBASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 AC114812.1-204ENST00000449669 728 ntBASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 PFN1P12-201ENST00000455938 534 ntBASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 RPL13AP20-201ENST00000459725 609 ntBASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 AC004066.1-201ENST00000502488 802 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms